Alternatives and similar repositories for miRTalk

Users that are interested in miRTalk are comparing it to the libraries listed below

• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆22Updated last year
• Coolgenome / PDAC
  ☆25Updated 10 months ago
• ZxZhou4150 / Redeconve
  Deconvolution of spatial transcriptomics at single-cell resolution
  ☆20Updated last year
• 3254c / scSurv
  a deep generative model for single-cell survival analysis
  ☆12Updated last month
• klarman-cell-observatory / HTAPP-Pipelines
  A record of the analysis pipelines used to create the HTAPP data
  ☆34Updated 8 months ago
• parveendabas / GBMatlas
  ☆18Updated 3 years ago
• CICAMS-Liu-lab / ECGEA
  ☆17Updated 4 years ago
• zgyaru / anti-PD1_ESCC
  ☆17Updated 2 years ago
• dpeerlab / progressive-plasticity-crc-metastasis
  Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"
  ☆17Updated last year
• ventolab / Human-Uterus-Cell-Altas_UHCA
  UHCA
  ☆11Updated 11 months ago
• SGDDNB / GeneSwitches
  Ordering gene-expression and functional events in single-cell experiments
  ☆27Updated last year
• ZJU-UoE-CCW-LAB / scCDC
  single-cell Contamination Detection and Correction
  ☆15Updated 11 months ago
• XZouProjects / scCODE
  The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data
  ☆14Updated 2 years ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆30Updated 3 years ago
• seasoncloud / Clonalscope
  Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalsc…
  ☆25Updated 3 months ago
• liuqivandy / SpaGene
  ☆24Updated 2 years ago
• horsedayday / eQTLsingle
  ☆15Updated 2 years ago
• MarioniLab / StabMap
  Mosaic single cell data integration using non-overlapping features
  ☆37Updated 3 years ago
• sdentro / copykat_pipeline
  ☆13Updated last year
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆31Updated 10 months ago
• YangJAT / HCA
  Hierarchical Cell Annotation
  ☆26Updated last year
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated last year
• miccec / GBMstates
  Scripts from the GBM cellular states paper
  ☆20Updated 4 years ago
• gabrielakinker / CCLE_heterogeneity
  ☆61Updated 2 years ago
• kaifuchenlab / MEBOCOST
  ☆32Updated last month
• jig4003 / Ragas
  R tools for analysis and visualization of single-cell subclustering data
  ☆17Updated 4 months ago
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆21Updated 5 years ago
• ventolab / Human-Gonadal-Development-Atlas_HGDA
  ☆21Updated last year
• wanglabtongji / STRIDE
  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …
  ☆26Updated last year