compbioNJU / CellFunTopicLinks
Functional Annotation for Single-Cell Transcriptomics
☆11Updated last year
Alternatives and similar repositories for CellFunTopic
Users that are interested in CellFunTopic are comparing it to the libraries listed below
Sorting:
- ☆17Updated 2 years ago
- Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-diseaseMolecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆13Updated last year
- ☆12Updated last year
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 6 months ago
- Hierarchical Cell Annotation☆26Updated 11 months ago
- ☆20Updated 3 months ago
- ☆12Updated 4 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated 10 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- R package for Bioconductor submission☆37Updated 2 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆10Updated last year
- An R package for visualising cell-cell interactions☆43Updated last year
- ☆15Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆24Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆10Updated 3 weeks ago
- Difference in Intercellular Communication from scRNA-seq data☆22Updated 2 weeks ago
- ☆22Updated 2 years ago
- ☆25Updated 9 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 4 months ago
- Calculate NEPC risk score from bulk transcriptome data or single-cell RNA-seq for prostate cancer☆15Updated 11 months ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆29Updated last year
- ☆16Updated 4 years ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- ☆13Updated 7 years ago
- ☆21Updated 10 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Updated 2 years ago