Alternatives and similar repositories for ggChIPvis:

Users that are interested in ggChIPvis are comparing it to the libraries listed below

• junjunlab / ggcirclize
  Creating Circular Graph with the Grammar of GGplot2
  ☆19Updated last year
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆32Updated last week
• junjunlab / tackPlotR
  An R package to visualize bigwigs.
  ☆29Updated 2 years ago
• maxsonBraunLab / cutTag-pipeline
  Pipeline for Cut&Tag analysis
  ☆20Updated last week
• junjunlab / GetTsite
  extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.
  ☆10Updated 3 years ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 5 years ago
• SGDDNB / translational_regulation
  Detection of differential translated genes using Ribo-seq
  ☆15Updated 4 years ago
• Asa12138 / MetaNet
  Network analysis for multi-omics
  ☆35Updated 2 weeks ago
• YaoLab-Bioinfo / shinyChromosome
  an R/Shiny application for interactive creation of non-circular plots of whole genomes
  ☆45Updated 2 years ago
• junjunlab / RiboProfiler
  Integrating Ribo-SEQ Upstream and Downstream Analysis
  ☆11Updated 6 months ago
• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆19Updated this week
• plantformatics / Socrates
  ☆21Updated last month
• twlab / TEProf2Paper
  TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
  ☆23Updated last year
• Aufiero / circRNAprofiler
  ☆10Updated 5 months ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆33Updated 3 years ago
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆30Updated 5 years ago
• shawnzhangyx / cvdc_scripts
  scripts for analyzing the CVDC data.
  ☆18Updated 5 years ago
• yuanlizhanshi / NGS_Workflow
  Some NGS workflow created by snakemake
  ☆13Updated 3 months ago
• ManchesterBioinference / IntegratingATAC-RNA-HiC
  scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper
  ☆24Updated 2 years ago
• junjunlab / GetTransTool
  Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.
  ☆20Updated 3 years ago
• YutingPKU / AnalysisPipeline-NGS
  ☆12Updated 4 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆27Updated last year
• dxsbiocc / ggideogram
  ggideogram is a ggplot2 extension package for drawing chromosome diagrams
  ☆11Updated 5 months ago
• maxsonBraunLab / gopeaks
  Peak caller for CUT&TAG data
  ☆26Updated 2 years ago
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year
• TianLab-Bioinfo / scMAGIC
  A robust and accurate cell type classifier for single cell RNA-seq data
  ☆16Updated 2 years ago
• guokai8 / VennDetail
  VennDetail: a bioconductor package for VennDiagram visualization and details extraction
  ☆29Updated 2 weeks ago
• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆76Updated 2 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆39Updated last month
• YuLab-SMU / ggsc
  🧠 Visualizing Single Cell and Spatial Transcriptomics
  ☆46Updated last week