soumelis-lab / ICELLNETLinks
☆22Updated 6 months ago
Alternatives and similar repositories for ICELLNET
Users that are interested in ICELLNET are comparing it to the libraries listed below
Sorting:
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 10 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 9 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 3 years ago
- R package for generalized binary covariance decomposition.☆14Updated 6 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- Landscape Single Cell Entropy☆21Updated 5 years ago
- ☆11Updated last year
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 5 months ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- ☆18Updated 3 years ago
- R package for Bioconductor submission☆38Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Difference in Intercellular Communication from scRNA-seq data☆24Updated 3 months ago
- ☆23Updated 3 months ago
- Single-cell Mutual Information-based Network Engineering Ranger☆22Updated 5 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆62Updated 2 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- Ordering gene-expression and functional events in single-cell experiments☆29Updated last year
- Single-cell Case Control Analysis☆52Updated this week
- BioTIP: Biological Tipping-Point Identification and Characterization☆23Updated 3 months ago
- ☆13Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- ☆17Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆17Updated last year