Alternatives and similar repositories for TOmicsVis

Users that are interested in TOmicsVis are comparing it to the libraries listed below

• junjunlab / transPlotR
  An elegant package to visualize gene structures
  ☆82Updated 2 years ago
• scottzijiezhang / m6A-seq_analysis_workflow
  A pipeline to process m6A-seq data and down stream analysis.
  ☆45Updated 5 years ago
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆57Updated 9 months ago
• junjunlab / tackPlotR
  An R package to visualize bigwigs.
  ☆31Updated 3 years ago
• Asa12138 / ReporterScore
  Generalized Reporter Score-based Functional Enrichment Method for Omics Data
  ☆77Updated 3 months ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆65Updated last year
• YuLab-SMU / createKEGGdb
  Create KEGG.db Package
  ☆62Updated 2 years ago
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆74Updated 3 months ago
• xuzhougeng / RNA-seq-downstream-analysis
  Arabidopsis RNA_-seq downstream analysis shiny app
  ☆30Updated 6 years ago
• tzhu-bio / cisDynet
  An integrated platform for modeling gene-regulatory dynamics and networks
  ☆32Updated last year
• junjunlab / BioSeqUtils
  Extract Sequence from Genome According to Annotation File
  ☆38Updated 5 months ago
• songw01 / MEGENA
  Multiscale embedded gene co-expression network analysis
  ☆55Updated last year
• al-mcintyre / merip_reanalysis_scripts
  Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq
  ☆51Updated 5 years ago
• sjdlabgroup / SAHMI
  ☆84Updated last year
• yezhengSTAT / CUTTag_tutorial
  Tutorial Website
  ☆59Updated 4 years ago
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• Asa12138 / MetaNet
  Network analysis for multi-omics
  ☆83Updated this week
• broadinstitute / gistic2
  Genomic Identification of Significant Targets in Cancer (GISTIC), version 2
  ☆51Updated 3 years ago
• menghaowei / ngstools
  My own tools code for NGS data analysis (Next Generation Sequencing)
  ☆30Updated 6 years ago
• reimandlab / ActivePathways
  Integrative pathway enrichment analysis of multivariate omics data
  ☆114Updated 3 months ago
• 3UTR / DaPars2
  Dynamics analysis of Alternative PolyAdenylation from RNA-seq
  ☆62Updated 2 years ago
• shiquan / PISA
  A collection of tools to process single-cell omics datasets.
  ☆50Updated 4 months ago
• AAlhendi1707 / countToFPKM
  Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)
  ☆62Updated 4 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆52Updated 3 months ago
• junchaoshi / sports1.1
  Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs
  ☆51Updated 2 months ago
• OlgaVT / Alternative-Splicing-Tools
  A list of alternative splicing analysis resources
  ☆46Updated 6 months ago
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆90Updated 6 months ago
• BioSenior / ggVolcano
  The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …
  ☆89Updated 2 years ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆36Updated last year
• Changwuuu / Cuproptosis-pancancer
  ☆18Updated last year