JinmiaoChenLab / ezSingleCell2Links
☆57Updated last year
Alternatives and similar repositories for ezSingleCell2
Users that are interested in ezSingleCell2 are comparing it to the libraries listed below
Sorting:
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last month
- Pan-Cancer Single Cell Classifier☆81Updated last year
- ☆62Updated 2 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆92Updated 7 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated last week
- scWGCNA☆61Updated 3 years ago
- Gene group activity utility functions for Scanpy☆99Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆67Updated last year
- Bostongene cell deconvolution algorithm from RNAseq☆60Updated last year
- ☆19Updated 3 years ago
- ☆80Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- Unified access to several second-generation deconvolution methods☆88Updated last week
- ☆16Updated 3 years ago
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆53Updated last year
- ☆48Updated last month
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆39Updated this week
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 4 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year
- Cell-type Relationship Analysis Workflow Done Across Distances☆38Updated last month
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Updated 4 years ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆36Updated 2 years ago
- ☆34Updated last month
- An R framework for choosing clustering parameters in scRNA-seq analysis pipelines☆36Updated 5 years ago
- ☆41Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆30Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆35Updated last month