☆58Jan 2, 2024Updated 2 years ago
Alternatives and similar repositories for ezSingleCell2
Users that are interested in ezSingleCell2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- LIANA: a LIgand-receptor ANalysis frAmework☆238Aug 7, 2024Updated last year
- ☆99Mar 20, 2026Updated 3 weeks ago
- ☆49Oct 29, 2025Updated 5 months ago
- a deep generative model for single-cell survival analysis☆20Dec 2, 2025Updated 4 months ago
- An R package for visualising cell-cell interactions☆47Mar 16, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Coarse-graining of large single-cell RNA-seq data into metacells☆98Feb 23, 2026Updated last month
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆67Oct 16, 2025Updated 5 months ago
- ☆46May 4, 2024Updated last year
- ☆18Oct 23, 2025Updated 5 months ago
- ☆127Mar 19, 2026Updated 3 weeks ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆16Mar 17, 2026Updated 3 weeks ago
- ☆22Oct 30, 2022Updated 3 years ago
- ☆13Feb 12, 2026Updated 2 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A tool for semi-automatic cell type harmonization and integration☆120Mar 9, 2026Updated last month
- BANKSY: spatial clustering☆139Oct 15, 2025Updated 5 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆70Apr 14, 2023Updated 2 years ago
- ☆29Mar 24, 2026Updated 2 weeks ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Multiview Intercellular SpaTial modeling framework☆72Jan 15, 2026Updated 2 months ago
- Deposited codes for snMultiome in human cortex manuscript☆13Aug 12, 2024Updated last year
- Analysis and visualization of RNA-Seq results☆30Mar 18, 2026Updated 3 weeks ago
- R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics☆38Mar 10, 2025Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆210Mar 26, 2026Updated 2 weeks ago
- ☆12Nov 7, 2022Updated 3 years ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆17Updated this week
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆14Dec 5, 2025Updated 4 months ago
- scGRO-seq analyses codes☆13Jan 9, 2024Updated 2 years ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing and spatial dat…☆298Updated this week
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Nov 18, 2021Updated 4 years ago
- A Toolbox for Spatial Transcriptomics Analysis☆165May 6, 2025Updated 11 months ago
- Gene group activity utility functions for Scanpy☆101Dec 21, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆23Jul 9, 2025Updated 9 months ago
- Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial …☆448Jan 22, 2026Updated 2 months ago
- ☆12Mar 27, 2026Updated 2 weeks ago
- Methods to discover gene programs on single-cell data☆179Apr 1, 2026Updated last week
- A docker image for single-cell analysis☆107Updated this week
- Single cell proteomics data processing☆31Updated this week
- trajectory inference☆107Jan 27, 2025Updated last year