☆14Oct 11, 2019Updated 6 years ago
Alternatives and similar repositories for thymusatlas
Users that are interested in thymusatlas are comparing it to the libraries listed below
Sorting:
- An R library for conducting analyses on COMPASS data.☆16Jun 10, 2021Updated 4 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 7 months ago
- TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.☆41Mar 18, 2022Updated 3 years ago
- ☆23Jul 9, 2025Updated 7 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- scripts associated with NAFLD-NASH project☆28May 23, 2024Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆23Jan 12, 2024Updated 2 years ago
- Global Waddington-OT☆23Mar 25, 2025Updated 11 months ago
- R implementation of GeneTrajectory☆68Apr 5, 2024Updated last year
- Capybara: A computational tool to measure cell identity and fate transitions☆61May 23, 2022Updated 3 years ago
- scWGCNA☆62Nov 8, 2022Updated 3 years ago
- R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics☆38Mar 10, 2025Updated 11 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆29Aug 16, 2021Updated 4 years ago
- R package IReNA☆29Nov 13, 2024Updated last year
- ☆40Jan 13, 2026Updated last month
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆51Feb 18, 2026Updated last week
- DNA methylation studies of mammalian species☆42Jan 21, 2026Updated last month
- ☆14Oct 17, 2024Updated last year
- ☆10Jan 20, 2023Updated 3 years ago
- ☆12Apr 26, 2020Updated 5 years ago
- Learning to Program via Python, and Scientific Python for Programmers course material☆13Jan 23, 2025Updated last year
- Localization of transcribed enhancers and quntification of their usage from the initiation sites of bidirectionally transcribed loci☆14Dec 19, 2024Updated last year
- ☆47May 4, 2024Updated last year
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated last year
- QLoRA: Efficient Finetuning of Quantized LLMs☆11Jun 1, 2023Updated 2 years ago
- ☆12Apr 4, 2023Updated 2 years ago
- Quantum Accelerated Genome Sequencing☆11Sep 7, 2021Updated 4 years ago
- ☆18Jan 20, 2026Updated last month
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆11Aug 4, 2020Updated 5 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆17Feb 20, 2026Updated last week
- Inferring multi-modality dynamics for single cell genomics data☆13Dec 18, 2025Updated 2 months ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Oct 15, 2020Updated 5 years ago
- Public Codebase supporting the paper "Modeling Cellular Perturbations with The Sparse Additive Mechanism Shift Variational Autoencoder" b…☆14Oct 20, 2023Updated 2 years ago
- This repository provides the dataset HEMIT for H&E to mIHC image-to-image translation task☆16Dec 11, 2024Updated last year
- ☆14Dec 18, 2025Updated 2 months ago
- ☆13Sep 24, 2025Updated 5 months ago
- Single cell ANANSE Gene-regulatory-network analysis from Seurat objects☆10Nov 12, 2023Updated 2 years ago
- R package for the identification of cancer-associated mutated genes using gene expression and mutation data.☆10Oct 29, 2021Updated 4 years ago
- ☆11Jul 8, 2024Updated last year