SunXQlab / scMLnet
Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks
☆26Updated 3 years ago
Alternatives and similar repositories for scMLnet:
Users that are interested in scMLnet are comparing it to the libraries listed below
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆24Updated last month
- Lung cancer 10X analysis☆11Updated 4 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆21Updated 9 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆32Updated 4 years ago
- Functions for single cell data analysis☆29Updated 3 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆21Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆28Updated 2 years ago
- Spatial transcriptomics of heart tissue☆20Updated 2 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆21Updated last year
- ☆12Updated 10 months ago
- ☆14Updated last year
- ☆13Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- Publically accessible code for DIISCO method☆10Updated 3 months ago
- ☆17Updated 3 years ago
- The codes and files for the study of subsolid nodules (SSN).☆13Updated 4 years ago
- Ordering gene-expression and functional events in single-cell experiments☆21Updated 11 months ago
- ☆31Updated 9 months ago
- analysis script for GBM single cell RNA seq data☆17Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 3 months ago
- ☆22Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆25Updated 3 months ago
- ☆54Updated last year
- ☆37Updated 2 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 2 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆28Updated 2 years ago
- Integration of gut cell atlases☆18Updated this week
- ☆27Updated last year
- ☆16Updated 11 months ago
- HCC single cell analysis for Alvarez, Benhammou et al.☆16Updated 2 years ago