Multivariate stochastic modeling for transcriptional dynamics with cell-specific latent time using SDEvelo
☆21Jan 28, 2025Updated last year
Alternatives and similar repositories for SDEvelo
Users that are interested in SDEvelo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Sep 29, 2025Updated 8 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Feb 22, 2025Updated last year
- ☆11Feb 11, 2021Updated 5 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated 2 weeks ago
- ☆13Apr 4, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆14Apr 2, 2025Updated last year
- R package for generalized binary covariance decomposition.☆16Jul 13, 2025Updated 10 months ago
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆22Apr 16, 2026Updated last month
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆20Apr 24, 2024Updated 2 years ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆35Sep 14, 2024Updated last year
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated last year
- ☆12Apr 6, 2022Updated 4 years ago
- ☆14Jun 10, 2025Updated 11 months ago
- ☆22May 16, 2026Updated 2 weeks ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆27May 7, 2026Updated 3 weeks ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 5 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆88Aug 10, 2025Updated 9 months ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆22Oct 19, 2022Updated 3 years ago
- A novel computational method for inferring cell-type-specific signaling networks using single-cell transcriptomics data for better charac…☆45Oct 10, 2025Updated 7 months ago
- ☆46May 4, 2024Updated 2 years ago
- Analysis and visualization of RNA-Seq results☆31May 1, 2026Updated 3 weeks ago
- inferring regulatory cellular dynamics☆121May 13, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Find lines across files by regex and edit them all at once with your $EDITOR☆71Apr 17, 2026Updated last month
- ☆26Oct 25, 2023Updated 2 years ago
- A Python package for jointly analyzing multimodal single-cell sequencing data☆26Jan 17, 2025Updated last year
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics☆37Mar 10, 2025Updated last year
- Annotatability, a method to identify meaningful patterns in single-cell genomics data through annotation-trainability analysis, which est…☆19Jun 23, 2025Updated 11 months ago
- ☆43Jan 9, 2021Updated 5 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆31Aug 16, 2021Updated 4 years ago
- ☆23Jan 6, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆64Apr 14, 2024Updated 2 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆27Oct 17, 2024Updated last year
- Interactive TUI scratchpad for building shell pipelines☆218Updated this week
- trajectory inference☆109Jan 27, 2025Updated last year
- ☆41Updated this week
- Robust identification of perturbed cell types in single-cell RNA-seq data☆40Nov 10, 2025Updated 6 months ago
- ☆28Mar 12, 2026Updated 2 months ago