meta-cancer / scPLCLinks
Codes for the scPLC project
☆65Updated 2 years ago
Alternatives and similar repositories for scPLC
Users that are interested in scPLC are comparing it to the libraries listed below
Sorting:
- Construct Tumor Transition Zone Microenvironment☆42Updated 6 months ago
- ☆45Updated 3 years ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆49Updated 3 years ago
- ☆34Updated last year
- Codes used in pan-T cell analysis☆59Updated 2 years ago
- ☆31Updated last year
- ☆30Updated 2 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆77Updated 7 months ago
- ☆49Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆104Updated last month
- These are scripts for pan-cacner B cells analyses.☆50Updated 10 months ago
- The integration of single cell rank-based gene set enrichment analysis☆122Updated 10 months ago
- ☆42Updated 10 months ago
- ☆104Updated 4 years ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆82Updated last year
- Code for reproducing the analysis in Gavish et al. "The transcriptional hallmarks of intra-tumor heterogeneity across a thousand tumors".☆112Updated 9 months ago
- A tool for semi-automatic cell type harmonization and integration☆105Updated 2 months ago
- ☆19Updated last year
- These are scripts for pan-cacner NK cells analyses.☆68Updated last year
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆45Updated last year
- ☆24Updated last year
- Single-cell Lung Cancer Atlas with 1.2M cells☆63Updated 4 months ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆70Updated 2 years ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆39Updated 3 years ago
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- Accurate and fast cell marker gene identification with COSG☆44Updated 2 months ago
- scRNA-seq analysis of EENT-ONB☆21Updated last year
- This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Pro…☆82Updated 7 months ago
- R code used to analyze single cell PDAC data☆37Updated 11 months ago
- R package for pathway analysis in scRNA-seq data☆73Updated 9 months ago