aet21 / SCENTLinks
Estimation of Single-Cell Potency with Single Cell Entropy
☆43Updated 2 years ago
Alternatives and similar repositories for SCENT
Users that are interested in SCENT are comparing it to the libraries listed below
Sorting:
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 5 months ago
- R package for Protein activity analysis of single-cell RNAseq.☆86Updated 3 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated 2 years ago
- Method for de novo mutation calling from droplet based single cell RNA seq data☆14Updated 4 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- Functions for single cell data analysis☆32Updated 4 years ago
- ☆50Updated 5 years ago
- ☆48Updated 3 years ago
- ☆37Updated 3 years ago
- Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper☆53Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Accurate and fast cell marker gene identification with COSG☆54Updated 3 weeks ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆57Updated last month
- ☆32Updated 10 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆29Updated 4 years ago
- Spatial transcriptomics of heart tissue☆28Updated 3 years ago
- Functional Inference of Gene Regulation☆49Updated last year
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- ☆13Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- ☆61Updated 2 years ago
- ☆32Updated 3 years ago
- FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight☆16Updated last year
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆40Updated 4 years ago
- ☆65Updated 6 years ago
- ☆40Updated 2 years ago
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆62Updated last year