xryanglab / SCASLLinks
single-cell clustering based on alternative splicing landscapes
☆21Updated last year
Alternatives and similar repositories for SCASL
Users that are interested in SCASL are comparing it to the libraries listed below
Sorting:
- ☆20Updated 11 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆28Updated 3 months ago
- Draw phylogenetic trees of tumor evolution☆81Updated 2 years ago
- Functional Inference of Gene Regulation☆46Updated last year
- ☆37Updated last year
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆50Updated last year
- ☆49Updated last year
- ☆18Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆22Updated last year
- Analysis of Paired-Tag datasets☆42Updated last year
- SNV calling from single cell sequencing☆104Updated 8 months ago
- ☆29Updated 9 months ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated 9 months ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆23Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Scripts used to perform the analyses to study the Biology of Myeloid Cells in Glioma Microenvironments☆18Updated 2 months ago
- ☆32Updated last year
- A computation framework designed to detect differential junctions usage between two groups at single cell level☆12Updated 4 years ago
- SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.☆77Updated last year
- ☆31Updated 2 years ago
- scWGCNA☆61Updated 2 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 3 months ago
- Create cisTarget databases☆52Updated last month
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated last year
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago
- ☆47Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated 9 months ago