☆10Jan 21, 2023Updated 3 years ago
Alternatives and similar repositories for MPTevol
Users that are interested in MPTevol are comparing it to the libraries listed below
Sorting:
- A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations☆35Jan 28, 2022Updated 4 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆25Jan 28, 2026Updated last month
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Jan 30, 2026Updated last month
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated last year
- Rscripts collection for ploting in daily research life☆10Jan 15, 2021Updated 5 years ago
- Easily Process a Batch of Cox Models☆23Jul 26, 2025Updated 7 months ago
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆13Oct 7, 2025Updated 5 months ago
- Functional Annotation for Single-Cell Transcriptomics☆11Jun 29, 2024Updated last year
- 癌症相关学习内容☆51Aug 9, 2019Updated 6 years ago
- DriverPower☆26Jan 18, 2025Updated last year
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆12Dec 6, 2021Updated 4 years ago
- Cancer circRNA identification pipeline with an ensemble approach☆18Dec 4, 2024Updated last year
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆29Oct 12, 2024Updated last year
- R package containing useful functions for mutational signature analysis☆86Mar 2, 2026Updated last week
- 上科大刘雪松课题组基因组学分析传承与分享知识库☆14Feb 21, 2020Updated 6 years ago
- This repository contained single-cell RNA-seq datasets with ICB treated patients☆14Nov 8, 2024Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Sep 16, 2021Updated 4 years ago
- Extracting gene sets from published pathway figures☆15May 23, 2023Updated 2 years ago
- Source code of openbiox homepage (under development status).☆14May 9, 2023Updated 2 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆21Aug 22, 2025Updated 6 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆54Jan 21, 2026Updated last month
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Nov 14, 2021Updated 4 years ago
- ☆41Apr 16, 2018Updated 7 years ago
- Mutational signature analysis for low statistics SNV data☆64Aug 7, 2024Updated last year
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- ☆17Dec 15, 2017Updated 8 years ago
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- Codes and Data for FFPEsig manuscript☆17Jan 17, 2024Updated 2 years ago
- openbiox 翻译计划☆16Jun 10, 2019Updated 6 years ago
- A variable-selection oriented LASSO bagging algorithm for biomarker development in omic-based translational research☆19Jul 7, 2023Updated 2 years ago
- A set of command line tools based on R and JavaScript.☆18Apr 21, 2020Updated 5 years ago
- MSigDB gene sets for multiple organisms in a tidy data format☆84Jul 22, 2025Updated 7 months ago
- 采用开源论坛系统Flarum建设GATK中文社区，该论坛所有帖子将以markdown代码形式发帖，所有的markdown源代码都会同步存放在此github的organization的这个project下面。GATK中文社区地址是：https://www.gatk.com.…☆17Oct 21, 2017Updated 8 years ago
- Integrating LASSO and bootstrapping algorithm to find best prognostic or predictive biomarkers☆21Oct 12, 2022Updated 3 years ago
- Analysis of single-cell ChIP-seq datasets : From count matrices to differential analysis☆20Jun 2, 2020Updated 5 years ago
- ☆24Jun 27, 2017Updated 8 years ago