Genentech / IsoscelesLinks
The Isoforms from Single-Cell; Long-read Expression Suite
☆31Updated 6 months ago
Alternatives and similar repositories for Isosceles
Users that are interested in Isosceles are comparing it to the libraries listed below
Sorting:
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆42Updated last week
- Single cell Nanopore sequencing data for Genotype and Phenotype☆54Updated 2 months ago
- A framework for performing single-cell and bulk read full-length analysis of mutations and splicing.☆38Updated last week
- Benchmarking long-read RNA-seq analysis tools☆27Updated 5 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆59Updated 7 months ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- SingleCell Nanopore sequencing data analysis☆60Updated last month
- ☆28Updated 7 months ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆36Updated last month
- Alternative polyadenylation detection from diverse data sources such as 3'-seq, long-read and short-reads.☆31Updated last year
- simplified cellranger for long-read data☆19Updated 3 months ago
- Repository for reproducing results for lr-kallisto☆9Updated 2 months ago
- Comparison of Hi-C Experiments using Structural Similarity.☆28Updated last year
- Classify output of AmpliconArchitect to detect types of focal amplifications present☆20Updated last month
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Statistically Significant loops from HiChIP data☆43Updated last year
- ☆23Updated 4 years ago
- A Python library to visualize and analyze long-read transcriptomes☆62Updated 2 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- HiC for copy Number variation and Translocation detection☆39Updated 3 years ago
- Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:☆20Updated last year
- Uncertainty-aware quantification of Transposable Elements expression in scRNA-seq☆17Updated 3 months ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated 11 months ago
- A single cell sequencing read simulator.☆33Updated 9 months ago
- Analysis of gene expression and splicing diversity in a subset of samples from the 1000 Genomes Project, including eQTL and sQTL discover…☆36Updated 11 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- Single-cell Hi-C data analysis toolbox☆27Updated 3 years ago
- Clustering TF motif models from multiple species (mostly focused on Drosophila and human) by similarity to remove redundancy☆27Updated 2 years ago
- A program for the analysis of single cell nanopore long read data☆19Updated 2 weeks ago
- Pipeline for Universal Mapping of ATAC-seq☆25Updated last year