StatBiomed / CamoTSSLinks
Detection and couting alternative TSS in single cells
☆15Updated last year
Alternatives and similar repositories for CamoTSS
Users that are interested in CamoTSS are comparing it to the libraries listed below
Sorting:
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- ☆35Updated 3 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆37Updated 2 weeks ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- Quantification of isoform usage and alternative polyadenylation (APA) from single-cell RNA-seq using a Nextflow-based pipeline.☆24Updated this week
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆18Updated 2 months ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆29Updated 9 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Transcription Factor Enrichment Analysis☆36Updated 3 weeks ago
- Single-cell Hi-C data analysis toolbox☆27Updated 4 years ago
- ☆51Updated last year
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆49Updated 3 months ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆24Updated last year
- Clustering TF motif models from multiple species (mostly focused on Drosophila and human) by similarity to remove redundancy☆27Updated 2 years ago
- ☆21Updated 3 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- RNA editing tests☆17Updated 5 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- ☆23Updated 7 months ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data☆33Updated 5 months ago
- ☆24Updated 4 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆31Updated 5 months ago
- A list of alternative splicing analysis resources☆46Updated 6 months ago
- Estimation of Promoter Activity from RNA-Seq data☆54Updated 2 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 9 months ago
- snakemake pipeline for Hi-C post-processing☆22Updated last year