StatBiomed / CamoTSSLinks
Detection and couting alternative TSS in single cells
☆16Updated last year
Alternatives and similar repositories for CamoTSS
Users that are interested in CamoTSS are comparing it to the libraries listed below
Sorting:
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Updated last year
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆21Updated last week
- Transcription Factor Enrichment Analysis☆36Updated last week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆41Updated last month
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Single-cell Hi-C data analysis toolbox☆27Updated 4 years ago
- ☆34Updated last month
- ☆26Updated 2 years ago
- Workflow for Sequenza, cellularity and ploidy☆25Updated 4 months ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆20Updated 4 months ago
- ☆22Updated 3 years ago
- ☆23Updated 9 months ago
- Quantification of isoform usage and alternative polyadenylation (APA) from single-cell RNA-seq using a Nextflow-based pipeline.☆30Updated last month
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 10 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Updated 7 years ago
- ☆36Updated 3 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated 3 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 months ago
- Long-read Isoform Quantification and Analysis☆38Updated 8 months ago
- RNA editing tests☆17Updated 5 years ago
- SingleCell Nanopore sequencing data analysis☆62Updated 6 months ago
- Micro DNA identification☆24Updated 4 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆18Updated last year
- Perform differential transcript usage (DTU) analysis of bulk or single-cell RNA-seq data. See documentation at:☆20Updated last year