StatBiomed / CamoTSSLinks
Detection and couting alternative TSS in single cells
☆15Updated last year
Alternatives and similar repositories for CamoTSS
Users that are interested in CamoTSS are comparing it to the libraries listed below
Sorting:
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆25Updated last year
- Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support☆38Updated last year
- HiC for copy Number variation and Translocation detection☆39Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.☆47Updated 2 months ago
- ☆23Updated 6 months ago
- ☆51Updated last year
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- snakemake pipeline for Hi-C post-processing☆22Updated last year
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆18Updated 2 months ago
- DeepLoop robustly identifies enhancer-promoter interactions from low-depth and single-cell Hi-C data☆32Updated 5 months ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆29Updated 8 months ago
- Statistically Significant loops from HiChIP data☆44Updated last year
- Single-cell Hi-C data analysis toolbox☆27Updated 4 years ago
- ☆35Updated 2 years ago
- polyApipe☆18Updated 6 months ago
- ☆21Updated 3 years ago
- RADAR is devised to detect and visualize all possible twelve-types of RNA editing events from RNA-seq datasets.☆20Updated last year
- dcHiC: Differential compartment analysis for Hi-C datasets☆72Updated last year
- RNA editing tests☆17Updated 4 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆40Updated 3 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 6 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆32Updated 2 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 3 years ago
- ☆20Updated 5 years ago