Extract Sequence from Genome According to Annotation File
☆40Apr 16, 2025Updated last year
Alternatives and similar repositories for BioSeqUtils
Users that are interested in BioSeqUtils are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆12Oct 14, 2024Updated last year
- Profile and Heatmap Visualization by Using ggplot2 and grid☆13Nov 21, 2023Updated 2 years ago
- An elegant package to visualize gene structures☆83Apr 8, 2023Updated 3 years ago
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated 6 months ago
- funny geom/stat functions for visualization☆12Aug 30, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- gghic makes visualization of Hi-C/-like data easily in R☆29Jan 23, 2026Updated 6 months ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆18Nov 29, 2024Updated last year
- An R package to visualize bigwigs.☆31Jul 5, 2022Updated 4 years ago
- Visualizing SingleCell data Using GGplot2☆38Sep 28, 2024Updated last year
- Creating Circular Graph with the Grammar of GGplot2☆22Jan 5, 2024Updated 2 years ago
- Sketch phylogenetic trees and networks☆26Aug 3, 2026Updated last week
- A Shiny App for Interactive RNAseq Analysis and Visualization☆15May 14, 2026Updated 3 months ago
- An effective alignment tool for long noisy 3C data (e.g. Pore-C and C-walk)☆16Oct 23, 2024Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Dec 7, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- A mosaic genome painting tool for plant genomes☆18May 6, 2026Updated 3 months ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆17Jun 17, 2025Updated last year
- ☆23Jul 20, 2026Updated 3 weeks ago
- An annotation package for ggplot plot☆121Nov 17, 2025Updated 8 months ago
- Extract gene length based on featureCount calculation gene nonredundant exon length method.☆20Feb 14, 2022Updated 4 years ago
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Aug 4, 2026Updated last week
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- Useful functions to make your scRNA-seq plot more cool!☆397Apr 18, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Extract longest transcript or longest CDS transcript from GTF annotation file or gencode transcripts fasta file.☆22Mar 25, 2022Updated 4 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 3 years ago
- R package to draw syntenic plots in 3 different styles☆46Feb 2, 2026Updated 6 months ago
- Implementation of Seurat's SpatialFeaturePlot to allow blended expression☆11Feb 28, 2025Updated last year
- ☆12Jun 7, 2024Updated 2 years ago
- high-performance BED-to-GTF converter written in Rust☆21Updated this week
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- plot genome alignment synteny☆20May 25, 2020Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- An implement R package to visualize GSEA results☆234Jul 14, 2026Updated last month
- extract gene TSS site form gencode/ensembl/gencode database GTF file and export bed format file.☆12Jan 24, 2022Updated 4 years ago
- Analyzing Hi-C data in R with HiCExperiment objects☆16Apr 29, 2026Updated 3 months ago
- Project bulk/single-cell RNA-seq data to given LSI space☆12Jan 17, 2022Updated 4 years ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆16Jun 24, 2025Updated last year