Construct Tumor Transition Zone Microenvironment
☆58Jun 25, 2025Updated 11 months ago
Alternatives and similar repositories for Cottrazm
Users that are interested in Cottrazm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Spatial Cellular Estimator for Tumors☆65May 5, 2026Updated last month
- ☆21Nov 9, 2023Updated 2 years ago
- ☆14Jan 24, 2024Updated 2 years ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆20May 13, 2026Updated last month
- ☆11May 24, 2024Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- simpler single cell RNAseq data Visualization☆12Feb 28, 2025Updated last year
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆75Oct 16, 2025Updated 7 months ago
- single-cell clustering based on alternative splicing landscapes☆23Mar 20, 2024Updated 2 years ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆50Aug 18, 2025Updated 9 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- Publically accessible code for DIISCO method☆13Oct 15, 2025Updated 8 months ago
- Hierarchical Cell Annotation☆31Nov 17, 2024Updated last year
- BANKSY: spatial clustering☆151May 30, 2026Updated 2 weeks ago
- ☆138Apr 24, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Quantifying metabolism activity at the single-cell resolution☆181Feb 18, 2026Updated 3 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆22Mar 25, 2026Updated 2 months ago
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- Accurate and fast cell marker gene identification with COSG☆66Feb 8, 2026Updated 4 months ago
- ☆37Jun 4, 2024Updated 2 years ago
- Feature Ranking in (possibly large) Clustered Single Cell Data☆42Apr 15, 2021Updated 5 years ago
- ☆34Feb 25, 2025Updated last year
- ☆13Sep 30, 2024Updated last year
- Framework for analysis of cell-types and Ligand-Receptor cooccurrences☆20Feb 13, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Toolbox for Spatial Transcriptomics Analysis☆168May 6, 2025Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- SPATA Package for spatial gene expression analysis☆21May 6, 2022Updated 4 years ago
- ☆89Jun 29, 2024Updated last year
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆647Mar 11, 2026Updated 3 months ago
- ☆13Jul 18, 2025Updated 10 months ago
- Unsupervised Inference of Developmental Directions for Single Cells☆26Jan 12, 2024Updated 2 years ago
- ☆14Mar 28, 2025Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆45Feb 19, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆21Dec 23, 2024Updated last year
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆37Jan 13, 2026Updated 5 months ago
- ☆59Feb 23, 2024Updated 2 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆122Apr 26, 2025Updated last year
- These are scripts for pan-cacner B cells analyses.☆59Jul 22, 2024Updated last year
- ☆16Sep 21, 2021Updated 4 years ago
- Pan-Cancer Single Cell Classifier☆87May 30, 2024Updated 2 years ago