Alternatives and similar repositories for SpliceWiz

Users that are interested in SpliceWiz are comparing it to the libraries listed below

• Xinglab / lr2rmats
  Long read to rMATS
  ☆32Updated 2 years ago
• XiDsLab / TAGET
  ☆20Updated 3 years ago
• gagneurlab / splicemap
  ☆23Updated 4 months ago
• zhongw2 / GeneTEFlow
  ☆23Updated 4 years ago
• Xinglab / rMATS-long
  ☆34Updated last month
• flemingtonlab / SpliceTools
  ☆17Updated last year
• oicr-gsi / sequenza
  Workflow for Sequenza, cellularity and ploidy
  ☆25Updated 4 months ago
• a2iEditing / deNovo-Detect
  ☆13Updated 3 years ago
• mortazavilab / cerberus
  ☆20Updated last year
• bioinform / ecTMB
  ☆18Updated 4 years ago
• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆31Updated 2 years ago
• StatBiomed / CamoTSS
  Detection and couting alternative TSS in single cells
  ☆16Updated last year
• smithlabcode / abismal
  Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.
  ☆20Updated last week
• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆20Updated 3 years ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆37Updated last year
• WGLab / LIQA
  Long-read Isoform Quantification and Analysis
  ☆38Updated 9 months ago
• tgen / bisbee
  alternative splicing analysis pipeline
  ☆20Updated 4 years ago
• jsh58 / DMRfinder
  Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data
  ☆28Updated 2 years ago
• SziKayLeung / Whole_Transcriptome_Paper
  ☆18Updated last year
• cortes-ciriano-lab / ReConPlot
  ☆24Updated last year
• mdozmorov / RNA-seq
  RNA-seq analysis scripts
  ☆15Updated last month
• RitataLU / ATACgraph
  ☆15Updated 2 years ago
• bartongroup / 2passtools
  Two pass alignment for long reads
  ☆22Updated 4 years ago
• MarWoes / wg-blimp
  wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data
  ☆28Updated 3 years ago
• homeveg / nuctools
  software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data
  ☆17Updated 6 years ago
• LappalainenLab / lorals
  ☆38Updated 2 years ago
• kircherlab / CADD-SV
  CADD-SV – a framework to score the effect of structural variants
  ☆17Updated 2 weeks ago
• dixonlab / hic_breakfinder
  ☆37Updated 6 years ago
• a-velt / Mfuzz_RNAseq
  A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.
  ☆23Updated 6 years ago
• Xinglab / isoCirc
  isoCirc
  ☆10Updated 2 years ago