Xinglab / SEASTARLinks
SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA
☆14Updated 7 years ago
Alternatives and similar repositories for SEASTAR
Users that are interested in SEASTAR are comparing it to the libraries listed below
Sorting:
- Tutorial Website☆60Updated 4 years ago
- Estimation of Promoter Activity from RNA-Seq data☆56Updated 4 months ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 2 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆82Updated 4 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- A list of alternative splicing analysis resources☆46Updated 8 months ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated last month
- ☆60Updated 4 months ago
- Small non-coding RNA annotation Pipeline Optimized for rRNA- and tRNA-Derived Small RNAs☆53Updated 4 months ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆83Updated 10 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 4 months ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 7 years ago
- RNA editing quantification in deep transcriptome data☆16Updated 4 months ago
- RNA editing tests☆17Updated 5 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 2 months ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- ☆20Updated 6 years ago
- SingleCell Nanopore sequencing data analysis☆62Updated 6 months ago
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆35Updated last year
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 4 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆26Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆63Updated 2 years ago
- ☆15Updated 3 years ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆78Updated 2 years ago