SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA
☆14Jan 21, 2018Updated 8 years ago
Alternatives and similar repositories for SEASTAR
Users that are interested in SEASTAR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Estimation of Promoter Activity from RNA-Seq data☆57Jul 14, 2025Updated 8 months ago
- ☆20Sep 28, 2019Updated 6 years ago
- Detection and couting alternative TSS in single cells☆17Apr 21, 2024Updated last year
- Systematic analyses of intronic polyadenylation from standard RNAseq data☆16Sep 10, 2024Updated last year
- ☆12Mar 19, 2026Updated 3 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Jun 17, 2020Updated 5 years ago
- ☆35Mar 17, 2026Updated 3 weeks ago
- ☆15Aug 25, 2022Updated 3 years ago
- RES-Scanner is a software package for genome-wide identification and annotation of RNA-editing sites for any species with matched RNA-Seq…☆12Jul 13, 2016Updated 9 years ago
- FLAME: Full Length Adjecency Matrix Enumeration - is a module that allows for the analysis of ONT Nanopore RNA long-read sequencing data.…☆12May 8, 2025Updated 11 months ago
- ☆18Jan 17, 2019Updated 7 years ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Nov 27, 2024Updated last year
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44May 11, 2017Updated 8 years ago
- ☆14May 3, 2024Updated last year
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- A deliberately simple Django app for managing IT inventory☆13Jul 14, 2016Updated 9 years ago
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 4 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Apr 10, 2020Updated 6 years ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Jul 7, 2016Updated 9 years ago
- cDNA read preprocessing☆87Jul 25, 2024Updated last year
- A simple django based inventory control system designed to meet government organizations needs.☆12Feb 16, 2011Updated 15 years ago
- Multi-nucleotide variants (MNVs) in gnomAD 2.1☆12Feb 27, 2026Updated last month
- Analysis pipelines for cancer genome sequencing in mice.☆23Jul 29, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- a versatile and flexible pipeline for analysing different variants of ChIA-PET data☆36Nov 25, 2024Updated last year
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆16May 17, 2022Updated 3 years ago
- DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)☆52Oct 16, 2022Updated 3 years ago
- ☆11Mar 10, 2024Updated 2 years ago
- A Python library to visualize and analyze long-read transcriptomes☆67Jan 19, 2026Updated 2 months ago
- Gene Set Clustering based on Functional annotation☆24May 3, 2024Updated last year
- ☆55Aug 1, 2024Updated last year
- Giraffe_View is designed to help assess and visualize the accuracy of long-read sequencing datasets.☆13Sep 3, 2024Updated last year
- an easy deindex tool for illumina multiple barcodes sequencing☆12Jul 30, 2015Updated 10 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Deprecated: please use GillesPy2☆12Oct 15, 2019Updated 6 years ago
- NaRnEA (Nonparametric analytical Rank-based Enrichment Analysis)☆11Mar 2, 2023Updated 3 years ago
- ☆18May 31, 2024Updated last year
- ☆11Dec 15, 2025Updated 3 months ago
- Pipeline for testing shifts in poly(A) tail lengths estimated by nanopolish☆10May 5, 2020Updated 5 years ago
- Bacterial Genomics workflow for short(Illumina) and long-read (Oxford Nanopore) sequencing data☆12Feb 20, 2026Updated last month
- ☆16Apr 5, 2026Updated last week