Xinglab / SEASTAR
SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA
☆13Updated 7 years ago
Alternatives and similar repositories for SEASTAR:
Users that are interested in SEASTAR are comparing it to the libraries listed below
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 9 months ago
- tools to find circRNAs in RNA-seq data☆42Updated 7 years ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- Long-read Isoform Quantification and Analysis☆39Updated 3 weeks ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Tutorial Website☆57Updated 4 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆43Updated 7 years ago
- single-nucleus nanopore reads processing pipeline☆15Updated last year
- SingleCell Nanopore sequencing data analysis☆57Updated 4 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- ATAC-seq processing pipeline☆32Updated 3 years ago
- Estimate locus specific human LINE-1 expression.☆33Updated 2 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆65Updated 5 years ago
- ☆56Updated 3 years ago
- A list of alternative splicing analysis resources☆43Updated 3 weeks ago
- A computational workflow for exitron splicing identification☆12Updated 7 months ago
- Estimation of Promoter Activity from RNA-Seq data☆53Updated 3 years ago
- RiboPlotR package for Ribo-plot☆15Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆22Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated last year
- ☆43Updated 2 years ago
- Process m6A/MeRIP-seq data in a single or batch job mode☆20Updated 4 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- Micro DNA identification☆22Updated 3 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆27Updated 3 years ago
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 5 years ago
- Quantitation and visualization of differential alternative splicing events☆10Updated last year
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆45Updated 3 weeks ago