wososa / PSI-SigmaLinks
PSI-Sigma
☆38Updated 2 years ago
Alternatives and similar repositories for PSI-Sigma
Users that are interested in PSI-Sigma are comparing it to the libraries listed below
Sorting:
- SingleCell Nanopore sequencing data analysis☆61Updated 5 months ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- ENCODE whole-genome bisulfite sequencing (WGBS) pipeline☆32Updated 3 years ago
- BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy …☆72Updated 11 months ago
- ENCODE long read RNA-seq pipeline☆51Updated 2 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆51Updated last month
- REDItools are python scripts to investigate RNA editing at genomic scale.☆68Updated 4 months ago
- A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to …☆23Updated 3 years ago
- ⛏ HLA predictions from NGS shotgun data☆55Updated 5 months ago
- A Python library to visualize and analyze long-read transcriptomes☆63Updated 6 months ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- IDR☆30Updated 2 years ago
- ☆34Updated this week
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 4 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated last year
- Long read to rMATS☆32Updated 2 years ago
- Full-length transcriptome splicing and mutation analysis☆84Updated last year
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 9 months ago
- A tool for the calculation of RNA-editing index for RNA seq data☆45Updated 3 weeks ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated last month
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆50Updated last month
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆64Updated last year
- ☆72Updated 2 years ago
- HiC for copy Number variation and Translocation detection☆39Updated 4 years ago
- ☆59Updated 4 months ago
- ☆38Updated 4 years ago
- QDNAseq package for Bioconductor☆53Updated last year
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆67Updated 6 years ago