wososa / PSI-Sigma
PSI-Sigma
☆38Updated last year
Alternatives and similar repositories for PSI-Sigma:
Users that are interested in PSI-Sigma are comparing it to the libraries listed below
- Long-read Isoform Quantification and Analysis☆39Updated 3 weeks ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 5 years ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆40Updated 4 months ago
- Long read to rMATS☆31Updated last year
- ENCODE long read RNA-seq pipeline☆44Updated 2 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆34Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆37Updated 2 years ago
- ENCODE whole-genome bisulfite sequencing (WGBS) pipeline☆29Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆46Updated last year
- ☆23Updated 3 years ago
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆27Updated last year
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆31Updated 3 years ago
- Version II of Mandalorion☆32Updated 5 years ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- ☆35Updated 5 years ago
- Tools for analyzing DNA methylation data☆36Updated last month
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆33Updated 3 years ago
- ☆33Updated last year
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- SingleCell Nanopore sequencing data analysis☆53Updated last month
- A Perl/R pipeline for plotting metagenes☆36Updated 3 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- Fork from https://bitbucket.org/mcgranahanlab/lohhla/src, modified for MSKCC needs☆30Updated last year
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆57Updated 3 months ago
- ☆21Updated last month
- ☆30Updated 6 years ago
- Tutorial Website☆55Updated 3 years ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago
- RNA editing tests☆16Updated 4 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago