Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment.
☆13Dec 4, 2023Updated 2 years ago
Alternatives and similar repositories for SpatialTME
Users that are interested in SpatialTME are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated last year
- rmarkdown-xaringan-slides☆11Jun 2, 2023Updated 2 years ago
- ☆37Sep 20, 2022Updated 3 years ago
- ☆16Feb 20, 2025Updated last year
- Scripts from the GBM cellular states paper☆21Feb 24, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Single Cell Analysis Operations☆14Nov 25, 2025Updated 4 months ago
- Construct Tumor Transition Zone Microenvironment☆57Jun 25, 2025Updated 9 months ago
- ☆24Oct 31, 2024Updated last year
- ☆24Mar 3, 2026Updated last month
- single-cell clustering based on alternative splicing landscapes☆23Mar 20, 2024Updated 2 years ago
- Hierarchical Cell Annotation☆28Nov 17, 2024Updated last year
- ☆63Dec 27, 2023Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R package to time somatic mutations☆68Dec 12, 2020Updated 5 years ago
- These are scripts for pan-cacner NK cells analyses.☆77Aug 18, 2023Updated 2 years ago
- Mutational signature analysis for low statistics SNV data☆64Aug 7, 2024Updated last year
- Using Pubmed data and tf.keras to predict if an ophthalmology paper will make it into a top 15 journal☆10May 4, 2020Updated 5 years ago
- The complete sequence of a Chinese individual☆12Oct 8, 2024Updated last year
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Jul 2, 2024Updated last year
- ☆11May 12, 2021Updated 4 years ago
- ☆14Mar 28, 2025Updated last year
- Figures for the CHM13 T2T SD paper.☆11Sep 12, 2021Updated 4 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- ☆38Nov 26, 2025Updated 4 months ago
- ☆10Jan 21, 2023Updated 3 years ago
- A self-supervised denoising algorithm.☆28Apr 6, 2024Updated 2 years ago
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated last month
- ☆12Feb 19, 2021Updated 5 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- ☆13Feb 17, 2022Updated 4 years ago
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆14Apr 9, 2022Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Oct 1, 2021Updated 4 years ago
- ☆12Nov 21, 2023Updated 2 years ago
- CancerMIRNome - an interactive analysis and visualization database for miRNome profiles of human cancer☆12Aug 9, 2024Updated last year
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated 2 years ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆48Aug 18, 2025Updated 7 months ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆34Dec 29, 2020Updated 5 years ago
- represent each cell in UMAP plots as a pie chart☆16Sep 27, 2021Updated 4 years ago