Alternatives and similar repositories for easier

Users that are interested in easier are comparing it to the libraries listed below

• data2intelligence / CytoSig_prediction
  Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts
  ☆14Updated 2 years ago
• olapuentesantana / easier_manuscript
  ☆15Updated 4 years ago
• lydiaMyr / ImmuCellAI-mouse
  ☆10Updated 5 months ago
• xushiabbvie / TDtool
  ☆12Updated last year
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆44Updated 2 months ago
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆28Updated 3 years ago
• BaderLab / MALAT1_threshold
  ☆15Updated 5 months ago
• satijalab / Mixscale
  ☆20Updated 3 weeks ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆39Updated 6 months ago
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆22Updated 2 weeks ago
• Coolgenome / GastricCancer
  ☆12Updated last year
• mainciburu / WAT3R
  Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)
  ☆21Updated 2 years ago
• MarioniLab / hbca
  Code used to process the data of the HBCA project
  ☆32Updated last year
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• marrlab / CAR_T_TargetIdentification
  Computational identification of targets for CAR-T cell therapy in AML
  ☆20Updated 2 years ago
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆32Updated 4 months ago
• jcolinge / BulkSignalR
  BulkSignalR
  ☆24Updated 3 months ago
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆25Updated 3 years ago
• compbioNJU / CellFunTopic
  Functional Annotation for Single-Cell Transcriptomics
  ☆11Updated last year
• YuLab-SMU / tigeR
  🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package
  ☆33Updated 4 months ago
• xyang2uchicago / BioTIP
  BioTIP: Biological Tipping-Point Identification and Characterization
  ☆22Updated 2 weeks ago
• CICAMS-Liu-lab / ECGEA
  ☆16Updated 4 years ago
• junjunlab / bulkPseudotime
  Pseudotime Analysis for Bulk Data
  ☆18Updated last year
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 7 months ago
• gustaveroussy / FG-Lab
  ☆10Updated last month
• liuhong-jia / scAnno
  ☆25Updated 4 months ago
• wwylab / DeMixT
  ☆37Updated 3 weeks ago
• LaughneyLab / ContactTracing_tutorial
  ☆17Updated last year
• jiang-junyao / CACIMAR
  cross-species analysis of cell identities, markers and regulations
  ☆12Updated 3 months ago