OlgaVT / Alternative-Splicing-Tools
A list of alternative splicing analysis resources
☆43Updated 2 weeks ago
Alternatives and similar repositories for Alternative-Splicing-Tools:
Users that are interested in Alternative-Splicing-Tools are comparing it to the libraries listed below
- Tutorial Website☆57Updated 4 years ago
- Estimate locus specific human LINE-1 expression.☆33Updated 2 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆36Updated 2 months ago
- CLIP-seq Analysis of Multi-mapped reads☆30Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆28Updated 4 years ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆62Updated 8 months ago
- ☆56Updated 3 years ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- ☆60Updated 8 months ago
- fork of RSeQC python RNAseq metrics suit of tools☆47Updated 6 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated 11 months ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- Estimation of Promoter Activity from RNA-Seq data☆51Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆80Updated 2 months ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆30Updated last year
- A computational workflow for exitron splicing identification☆12Updated 7 months ago
- release version☆51Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆57Updated last year
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆50Updated last month
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 2 months ago
- ☆48Updated 4 years ago
- Unsorted scripts for bioinformatics☆60Updated 3 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆69Updated 2 weeks ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆50Updated 5 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago