OlgaVT / Alternative-Splicing-Tools
A list of alternative splicing analysis resources
☆41Updated 3 months ago
Alternatives and similar repositories for Alternative-Splicing-Tools:
Users that are interested in Alternative-Splicing-Tools are comparing it to the libraries listed below
- Tutorial Website☆56Updated 4 years ago
- perl cworld module and collection of utility/analysis scripts for C data (3C, 4C, 5C, Hi-C)☆66Updated 5 years ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Estimation of Promoter Activity from RNA-Seq data☆50Updated 3 years ago
- ☆54Updated 3 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Estimate locus specific human LINE-1 expression.☆32Updated 2 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆80Updated 3 weeks ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆38Updated 3 years ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆27Updated 4 years ago
- A computational workflow for exitron splicing identification☆12Updated 5 months ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆36Updated 2 weeks ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated 9 months ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆51Updated 3 years ago
- Links to ATAC-seq analysis tools☆60Updated 3 years ago
- Demultiplexes a fastq.☆44Updated 4 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆69Updated last month
- release version☆51Updated 2 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆43Updated 4 years ago
- Allele-specific alignment sorting☆54Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆55Updated last year
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆73Updated 3 years ago
- ☆58Updated 6 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆46Updated last year
- Quantification of transposable element expression using RNA-seq☆64Updated last year
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆61Updated 6 months ago
- Basic workflow for ATAC-seq analysis☆73Updated 11 months ago
- Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanop…☆73Updated last year
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- CLIP-seq Analysis of Multi-mapped reads☆29Updated 3 years ago