wdecoster / kyber
☆19Updated 3 weeks ago
Alternatives and similar repositories for kyber:
Users that are interested in kyber are comparing it to the libraries listed below
- WDL workflows for variant calling and assembly using ONT☆30Updated this week
- Structural variant discovery and genotyping from mapped PacBio HiFi data☆37Updated 2 weeks ago
- Tumour-only somatic mutation calling using long reads☆25Updated 3 months ago
- Pipeline for de novo clustering of long transcriptomic reads☆26Updated 3 years ago
- LongcallR is a small variant caller for single molecule long-read RNA-seq data☆42Updated 3 months ago
- implicit pangenome graph☆51Updated this week
- Set of tools to manipulate and visualize modified base bam files☆49Updated 2 years ago
- Segmental Duplication Assembler (SDA).☆44Updated last year
- Creating alignment plots from bam files☆56Updated this week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆42Updated 3 months ago
- crab go snap snap☆35Updated this week
- long read RNA-seq quantification☆73Updated last week
- GFAffix identifies walk-preserving shared affixes in variation graphs and collapses them into a non-redundant graph structure.☆35Updated 3 weeks ago
- Copy number caller for long read data including SNV utilization☆55Updated 4 months ago
- Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data☆32Updated this week
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆30Updated 2 months ago
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆33Updated last month
- Fast and exact gap-affine partial order alignment☆41Updated 2 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆56Updated last month
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆28Updated last year
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆35Updated last month
- Lightweight mosaic/somatic SV caller for long reads (WIP)☆29Updated last month
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆40Updated 3 months ago
- ☆31Updated last month
- Methylmap is a tool for visualization of modified nucleotide frequencies for large cohort sizes.☆18Updated 3 weeks ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- ☆41Updated 2 months ago
- Dynamic, adaptive sampling during nanopore sequencing☆29Updated 3 months ago
- ☆45Updated last year
- Simple pileup-based variant caller☆86Updated 9 months ago