VEP-like tool for sequence ontology and HGVS annotation of VCF files
☆31Jun 26, 2026Updated last week
Alternatives and similar repositories for mehari
Users that are interested in mehari are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A port of biocommons/hgvs to the Rust programming language☆18Jun 22, 2026Updated last week
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Jun 25, 2026Updated last week
- Per-base per-nucleotide depth analysis☆150May 9, 2026Updated last month
- A nextflow pipeline for calling exome CNVs☆14Jun 22, 2026Updated last week
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Jun 17, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- using all the bits for echt rapid variant annotation and filtering☆162Apr 30, 2026Updated 2 months ago
- ☆22Jul 28, 2022Updated 3 years ago
- VarFish: comprehensive DNA variant analysis for diagnostics and research☆53Jun 25, 2026Updated last week
- A snakemake workflow for benchmarking variant calling approaches with Genome in a Bottle (GIAB), CHM (syndip) or other custom datasets☆13Jun 26, 2026Updated last week
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- Implicit Interval Tree with Interpolation Index☆43Jul 13, 2022Updated 3 years ago
- A command line program for large scale buffering between piped programs☆17Nov 19, 2021Updated 4 years ago
- ☆17Updated this week
- vembrane filters, sorts, and transforms VCF records using python expressions☆70Jun 23, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Numerical Encoding for Human Genetic Variants☆43Jun 8, 2023Updated 3 years ago
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆32Nov 25, 2024Updated last year
- Structural variant benchmark☆24Mar 4, 2025Updated last year
- ☆22Jan 3, 2025Updated last year
- ☆12Apr 18, 2022Updated 4 years ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Performance-critical tools to manipulate, analyze, and process genomic interval data☆28Jun 19, 2026Updated 2 weeks ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆37Sep 13, 2023Updated 2 years ago
- Wally: Visualization of aligned sequencing reads and contigs☆125Oct 9, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Generic human DNA variant annotation pipeline☆60Feb 13, 2024Updated 2 years ago
- expressions on VCFs☆92Mar 17, 2026Updated 3 months ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- Tandem repeat genotyping from long reads☆25Updated this week
- Exon is an OLAP query engine specifically for biology and life science applications.☆71Mar 26, 2025Updated last year
- A Rust library for storing generic genomic data by sorted chromosome name☆17Sep 26, 2024Updated last year
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Jun 10, 2022Updated 4 years ago
- Portable Crystal binary distributions for Linux on x86_64☆15Mar 22, 2021Updated 5 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆19Apr 24, 2026Updated 2 months ago
- Tandem repeat genotyping with long reads☆38Sep 23, 2025Updated 9 months ago
- Kmer Analysis of Pileups for Genotyping☆40Mar 6, 2026Updated 3 months ago
- an interactive visualization and interpretation framework of reference-projected pangenome graphs☆42Feb 15, 2025Updated last year
- Fast interval intersection library☆44Jun 17, 2026Updated 2 weeks ago
- Scrooge is a high-performance pairwise sequence aligner based on the GenASM algorithm. Scrooge includes three novel algorithmic improveme…☆38Jun 23, 2023Updated 3 years ago
- Short Tandem Repeat disease loci resource☆29Updated this week