rhysf / Diamond2GOLinks
☆20Updated 9 months ago
Alternatives and similar repositories for Diamond2GO
Users that are interested in Diamond2GO are comparing it to the libraries listed below
Sorting:
- Minimizer-based assembly scaffolding and mapping using long reads☆40Updated 7 months ago
- Consensus genome annotation using OMA☆24Updated last month
- An R package to infer and analyze synteny networks from protein sequences☆30Updated 5 months ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆32Updated last month
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 2 months ago
- a broadly applicable tool for automated gene identification and retrieval☆31Updated 6 months ago
- A comparative genome scaffolding tool☆17Updated 6 years ago
- Genome alignment and synteny plots☆30Updated 2 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 3 months ago
- ☆20Updated 3 years ago
- Yet another Hi-C scaffolding tool☆19Updated 7 months ago
- ☆23Updated 9 months ago
- scripts to parse and analyse MCScanX collinearity output☆31Updated 5 years ago
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Updated 10 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆27Updated 3 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- convert a blast output to a bed file☆12Updated 9 years ago
- Better Alignments with Translated HMMER☆21Updated last week
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Updated 6 months ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 3 years ago
- Add multiple thread function for genome comparison☆15Updated 3 years ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files☆20Updated 2 years ago
- Three bacterial GWAS methods all rolled into one easy-to-use R package☆22Updated last year
- ContScout sequence contamination filter tool☆20Updated 2 weeks ago
- Multi-genome synteny block visualization tool☆38Updated 4 months ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆28Updated 8 months ago
- Domain based annotation of transposable elements☆19Updated 3 weeks ago
- A pipeline to use Lep-Map3 to create linkage maps and LepAnchor for anchoring and orienting genome assemblies with said linkage maps.☆13Updated last year
- transposable element typing pipeline☆18Updated last year
- ☆26Updated 4 years ago