Phylogenetic profiling with orthology data
☆13Aug 5, 2026Updated this week
Alternatives and similar repositories for HogProf
Users that are interested in HogProf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆35Jan 15, 2025Updated last year
- A tool for concatenating multiple fasta alignments for supermatrix phylogenetic analyses☆24Apr 30, 2026Updated 3 months ago
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆12Jul 11, 2026Updated 3 weeks ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆14Jul 12, 2024Updated 2 years ago
- Pooled Sequencing Analysis for Sex Signal☆15Sep 14, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Decomposition Into Single-COpy gene trees (DISCO) is a method for decomposing multi-copy gene-family trees while attempting to preserve o…☆13Jun 19, 2025Updated last year
- A fully open source peristaltic pump with multiple independent channels.☆17May 23, 2026Updated 2 months ago
- A phylogenetic profile analysis tool☆38Jul 29, 2026Updated last week
- This repository contains the installation zip file, user manual, example data, and source code for the PyXlinkViewer plugin for PyMOL v2☆10Jul 3, 2023Updated 3 years ago
- ☆15Jul 21, 2022Updated 4 years ago
- ☆16Apr 3, 2023Updated 3 years ago
- Evolutionary Sparse Learning - Paired Species Contrast☆16Jul 22, 2026Updated 2 weeks ago
- ☆18Jan 29, 2025Updated last year
- ☆16Apr 11, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- The MafFilter genome alignment processor☆19Apr 10, 2026Updated 4 months ago
- Phasing reads with secondary alignments☆22Nov 30, 2024Updated last year
- ☆17Mar 2, 2024Updated 2 years ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- Gene tree - species tree reconciliation from gene tree distributions☆43Apr 30, 2026Updated 3 months ago
- Parallel implementation of OrthoMCL☆21Aug 26, 2022Updated 3 years ago
- A Hi-C scaffolding method☆22Dec 22, 2021Updated 4 years ago
- Code repository for the Global Ant Genomics Alliance☆18Jun 16, 2025Updated last year
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆18Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- CRISPR, faster, better – The Crackling method for whole-genome target detection☆11Jan 11, 2024Updated 2 years ago
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Jul 29, 2026Updated last week
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- Assembly statistic visualisation☆96Dec 22, 2023Updated 2 years ago
- CAAStools is a bioinformatics toolbox that allows the user to identify and validate CAAS on MSA of orthologous proteins.☆25Nov 21, 2023Updated 2 years ago
- ☆22Jan 13, 2026Updated 6 months ago
- Scripts for homology and orthology assessment from genomic sequences.☆19Jul 24, 2026Updated 2 weeks ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Sep 7, 2022Updated 3 years ago
- High throughput python tool for mining and analysis of gene duplications.☆16Jul 30, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆36Sep 11, 2025Updated 10 months ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆18Nov 29, 2024Updated last year
- Diamond2GO is a set of tools that can rapidly assign Gene Ontology (GO) terms and perform functional enrichment for large-scale functiona…☆26Mar 11, 2026Updated 4 months ago
- Automatically exported from code.google.com/p/densitree☆31Jul 27, 2025Updated last year