Inverted Repeats Finder: a program to analyze DNA and RNA sequences
☆22Feb 21, 2025Updated last year
Alternatives and similar repositories for IRF
Users that are interested in IRF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Nov 30, 2025Updated 10 months ago
- BLAST-Like Alignment Tool☆23Jan 11, 2019Updated 7 years ago
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- ☆40Jun 19, 2023Updated 3 years ago
- Scalable high-throughput short-read open reading frame prediction☆12Jan 13, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Papillomavirus genome annotation tool☆10May 2, 2023Updated 3 years ago
- Tool to detect giant viruses aka giant endogenous viral elements (GEVEs) integrated into eukaryotic genomes.☆11Jun 10, 2026Updated 4 months ago
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 11 months ago
- Vanjari is a tool for the classification of viruses using neural networks☆14Nov 21, 2025Updated 11 months ago
- Pathogenfinder2☆19Apr 20, 2026Updated 6 months ago
- Identify non-B forming motifs☆15Jun 22, 2026Updated 4 months ago
- ☆20Sep 16, 2026Updated last month
- Tandem Repeats Finder: a program to analyze DNA sequences☆222Jan 16, 2023Updated 3 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Jan 21, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Download assembly files from NCBI☆12May 9, 2023Updated 3 years ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 6 years ago
- Pipelines for re-analysis of iCLIP and scRNA-Seq data for UMI-tools publication☆11Jun 13, 2022Updated 4 years ago
- A taxonomic classifier for shotgun metagenomics reads☆10Aug 26, 2026Updated 2 months ago
- RNA virus analysis toolkit☆25Oct 14, 2026Updated 2 weeks ago
- Metagenomic Analysis in Real Time☆31Updated this week
- CAMITAX: Taxon labels for microbial genomes☆32Dec 14, 2023Updated 2 years ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆96May 3, 2025Updated last year
- ☆13Sep 20, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- StaphScope is a comprehensive bioinformatics tool for Staphylococcus aureus genomic analysis including MLST typing, spa typing, SCCme…☆37Updated this week
- Plasmid analysis using rearrangement distances☆56Jul 19, 2026Updated 3 months ago
- Manipulate and generate figures for trees in Newick format☆22Jul 31, 2025Updated last year
- This repository contains R code for building a heatmap and histogram with the output of FastANI☆18Sep 14, 2021Updated 5 years ago
- FLASH (Fast Length Adjustment of SHort reads); mirror of https://git.code.sf.net/p/flashpage/code☆16Mar 6, 2018Updated 8 years ago
- ☆18Oct 7, 2024Updated 2 years ago
- Taxon-aware analysis of clustered protein sequences☆31Jul 1, 2024Updated 2 years ago
- map Illumina metagenomes to genomes!☆38Jan 22, 2026Updated 9 months ago
- Pipeline detecting distant and putative novel insertion sequences in prokaryotic genomes☆13Jun 10, 2021Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆26Jul 21, 2023Updated 3 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- 🧬Genomes to proteins, multi-level visualization library☆17Updated this week
- ☆120Oct 16, 2026Updated last week
- ☆15Jul 7, 2024Updated 2 years ago
- Wavefront alignment algorithm (WFA) in Golang☆33Updated this week
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated 4 months ago