Database of virus RdRP barcode sequences
☆16Jul 5, 2024Updated last year
Alternatives and similar repositories for palmdb
Users that are interested in palmdb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆26Jun 26, 2025Updated 9 months ago
- R Data Exploration for Serratus☆16Mar 29, 2023Updated 3 years ago
- ☆17May 26, 2022Updated 3 years ago
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆11Jul 4, 2025Updated 9 months ago
- This is graphanalyzer.py, a script designed to automatically interpret the outputs generated by vConTACT2 when using the INPHARED databas…☆19Nov 29, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Latest MOCAT2 version☆18Mar 8, 2021Updated 5 years ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆20Nov 15, 2022Updated 3 years ago
- ☆34Oct 6, 2025Updated 6 months ago
- VirHostMatcher: matching hosts of viruses based on oligonucleotide frequency (ONF) comparison☆31Jul 28, 2018Updated 7 years ago
- ☆35Jun 26, 2025Updated 9 months ago
- Virus Protein Family tools☆31Jul 20, 2022Updated 3 years ago
- Identification of viral RdRPs in single-cell RNA sequencing data☆13Mar 12, 2026Updated last month
- RNA dependent RNA Polymerase Palmprint Analysis☆12Aug 1, 2024Updated last year
- Ultra-deep search for novel viruses☆275Mar 29, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- viralComplete: BLAST-based viral completeness verification☆23Oct 4, 2021Updated 4 years ago
- CCTyper: Automatic detection and subtyping of CRISPR-Cas operons☆108Feb 15, 2024Updated 2 years ago
- An open database of vertebrate-virus interactions☆41Updated this week
- Cenote-Taker2: Discover and Annotate Divergent Viral Contigs (Please use Cenote-Taker 3 instead)☆55Jan 19, 2024Updated 2 years ago
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆114Mar 5, 2026Updated last month
- Conditional Auto-Regressive LASSO in R☆20Nov 11, 2022Updated 3 years ago
- ☆17Mar 13, 2026Updated last month
- Exploring the "dusk matter" of the RNA virosphere☆37Mar 25, 2022Updated 4 years ago
- a comparative genome browser for bacteriophages☆21Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Robust Open Reading Frame prediction (ANGLE re-implementation)☆16Aug 2, 2021Updated 4 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- Downstream processing of VAMB binning for Viral Elucidation☆55Jul 3, 2024Updated last year
- Metagenomics-related extended functionalities to samtools☆22Jul 6, 2023Updated 2 years ago
- ☆23May 13, 2024Updated last year
- Identifying viruses from metagenomic data by deep learning☆150Jun 1, 2025Updated 10 months ago
- Freelance bioinformaticians directory☆10Feb 10, 2023Updated 3 years ago
- viralVerify: viral contig verification tool☆74Feb 19, 2026Updated last month
- Scripts to quality control for metagenomic raw data, including removing the adapters, low quality reads, bases or PCR duplicates☆18Aug 13, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Sep 20, 2019Updated 6 years ago
- Simple Python interface to CoverM's fast coverage estimation functions☆10Dec 20, 2024Updated last year
- viral-ngs: complete pipelines☆73Updated this week
- viralFlye pipeline☆18Aug 12, 2024Updated last year
- a versatile toolkit for processing and analyzing diverse types of sequence data☆22Apr 4, 2026Updated last week
- VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies☆148Mar 4, 2026Updated last month
- Shell bootloader for data science.☆10Updated this week