☆13Feb 27, 2020Updated 6 years ago
Alternatives and similar repositories for ViralHostPredictor
Users that are interested in ViralHostPredictor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for Host-Pathogen Phylogeny Project. Paper DOI: 10.1038/nature22975☆15May 7, 2020Updated 6 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences…☆19Apr 15, 2026Updated 4 months ago
- An open database of vertebrate-virus interactions☆44Jun 9, 2026Updated 2 months ago
- A tool for identifying phages and plasmids from metagenomic fragments using deep learning☆44Apr 13, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- HOTSPOT is a hierarchical host prediction tool for plasmid contigs using Transformer.☆10Apr 22, 2024Updated 2 years ago
- Points of Significance: Adding realism to the SIR model for infectious disease epidemics☆13Nov 30, 2021Updated 4 years ago
- Slides of my introduction to the Tidyverse☆16Oct 22, 2020Updated 5 years ago
- Regression-based multi-period difference-in-differences with heterogenous treatment effects☆13Mar 11, 2022Updated 4 years ago
- Development version of phaseR, an R package for phase plane analysis of one- and two-dimensional autonomous ODE systems☆16Sep 2, 2022Updated 3 years ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 11 months ago
- ☆11Sep 28, 2017Updated 8 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- An RNA virus strain-level identification tool for short reads.☆23Apr 6, 2026Updated 4 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 6 years ago
- Virus Identification☆28May 26, 2025Updated last year
- Supplementary data for co-occurrence manuscript☆10Dec 19, 2019Updated 6 years ago
- Python package for conversions between ENSEMBL IDs and gene names (annotables + pyensembl)☆11Feb 2, 2026Updated 6 months ago
- Analysis tools for PhIP-seq experiments☆12Jan 24, 2022Updated 4 years ago
- ☆19Nov 18, 2025Updated 9 months ago
- ☆18Apr 28, 2025Updated last year
- Higher-Order Co-occurrence☆12Nov 9, 2021Updated 4 years ago
- ☆12May 20, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Here we proposed two novel algorithms, the Direct Subsequence Dynamic Time Warping for nanopore raw signal search (DSDTWnano) and the con…☆10Jul 13, 2020Updated 6 years ago
- 这里收录比较实用的计算机相关技术书籍,可以在短期之内入门的简单实用教程、一些技术网站以及一些写的比较好的博文,欢迎Fork,你也可以通过Pull Request参与编辑。☆10Jul 21, 2016Updated 10 years ago
- single cell RNA-seq analysis template based on online resources☆11Jul 1, 2018Updated 8 years ago
- Nanopore plasmid pipeline (FAST5 basecalling, assembly, plasmid identification and antimicrobial resistance genes identification).☆13Apr 20, 2021Updated 5 years ago
- A free and fast alternative for qualitative-data-analysis (like MaxQDA)☆16Apr 29, 2015Updated 11 years ago
- Bayesian enrichment estimation in R☆11Nov 15, 2025Updated 9 months ago
- ☆11Oct 31, 2023Updated 2 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 6 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Jul 7, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Web-based software for qualitative data analysis☆12Aug 17, 2018Updated 8 years ago
- ☆29Mar 21, 2019Updated 7 years ago
- Resources associated with econ course 34430☆16Dec 7, 2017Updated 8 years ago
- Infer selection pressures on features of amino acid CDR3 sequences.☆25Apr 17, 2024Updated 2 years ago
- ☆35Oct 6, 2025Updated 10 months ago
- Graph convolutional neural network for host prediction☆18Jul 13, 2025Updated last year
- Multivariate scales for ggplot2☆99May 22, 2026Updated 2 months ago