uclahs-cds / package-moPepGenLinks
Multi-Omics Peptide Generator
☆30Updated last month
Alternatives and similar repositories for package-moPepGen
Users that are interested in package-moPepGen are comparing it to the libraries listed below
Sorting:
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆42Updated 3 weeks ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- DRUGZ software☆25Updated 4 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆27Updated last year
- BAGEL software☆28Updated last year
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Updated 2 years ago
- Integration ribosome profiling - mass spectrometry☆15Updated last month
- model-based understanding of single-cell CRISPR screening☆26Updated last year
- ☆38Updated 2 years ago
- Absolute quantification package based on quantms.io☆16Updated 2 months ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- ☆18Updated last year
- ☆11Updated 5 years ago
- A guide to running MaxQuant in Linux☆35Updated 5 years ago
- ☆42Updated 3 months ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 3 weeks ago
- ☆21Updated 3 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- HLA-II ligand predictor.☆45Updated 2 years ago
- ☆49Updated 3 years ago
- Predicting gene expression levels from genomic sequences☆55Updated 5 years ago
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Updated 10 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆29Updated 3 weeks ago
- Saluki, a method to predict mRNA half-lives from sequence☆27Updated 3 years ago
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆26Updated last week
- Feature-rich Python implementation of the tximport package for gene count estimation.☆39Updated last month
- NeoDisc - A computational pipeline for the identification and prioritization of immunogenic tumor-specific HLA-I and -II antigens from ge…☆13Updated last year
- A collection of useful functions for bioinformatics data analysis☆24Updated this week