uclahs-cds / package-moPepGenLinks
Multi-Omics Peptide Generator
☆30Updated 3 months ago
Alternatives and similar repositories for package-moPepGen
Users that are interested in package-moPepGen are comparing it to the libraries listed below
Sorting:
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated last year
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆44Updated last week
- ☆38Updated 2 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆28Updated last year
- DRUGZ software☆24Updated 4 years ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆43Updated 3 months ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- BAGEL software☆28Updated 2 years ago
- HLA-II ligand predictor.☆46Updated 2 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- SPLICE-q -- A Python tool for genome-wide SPLIcing Efficiency quantification from RNA-seq data.☆12Updated 2 years ago
- A collection of useful functions for bioinformatics data analysis☆24Updated 2 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Elucidating the Utility of Genomic Elements with Neural Nets☆69Updated last year
- https://www.biorxiv.org/content/10.1101/2023.07.03.547592v2☆32Updated last year
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆26Updated 3 years ago
- model-based understanding of single-cell CRISPR screening☆26Updated last year
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆64Updated 5 months ago
- ☆20Updated last year
- ☆39Updated 7 months ago
- Absolute quantification package based on quantms.io☆16Updated 4 months ago
- 🏺 Exploring novel tumor epitope identification☆38Updated 5 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- Integration ribosome profiling - mass spectrometry☆15Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- ☆18Updated 9 months ago
- ☆48Updated 3 years ago