smith-chem-wisc / FlashLFQ
Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
☆20Updated 2 months ago
Alternatives and similar repositories for FlashLFQ:
Users that are interested in FlashLFQ are comparing it to the libraries listed below
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆21Updated last month
- Instrument Application Programming Interface☆45Updated last week
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆44Updated this week
- ☆13Updated 11 months ago
- ☆25Updated last year
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 2 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆25Updated 2 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆47Updated this week
- ☆25Updated 2 weeks ago
- Mass spectrometry data visualization☆36Updated 4 years ago
- The Git Account of LCMSMethods.org☆11Updated 5 years ago
- An open-source Python package to unify raw MS data accession and storage.☆19Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆41Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆37Updated 2 weeks ago
- A tool for summarizing open search results☆15Updated last week
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 2 years ago
- A python package for fast post translational modification localization, powered by Cython.☆18Updated last year
- MS/MS prediction for peptides☆22Updated 4 years ago
- ☆15Updated 3 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- Democratizing ML in proteomics☆34Updated last week
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆43Updated 2 years ago
- ☆17Updated 3 years ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆43Updated this week
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated this week
- Python package for investigating the structural context of PTMs☆28Updated last month
- A label free quantification tool.☆16Updated 8 months ago
- ☆35Updated 3 weeks ago
- PDV: an integrative proteomics data viewer☆45Updated last month
- EasyPQP: Simple library generation for OpenSWATH☆10Updated last month