A Python package for peptide sequence analysis built around ProForma 2.1 notation. Calculate masses, generate fragments, predict isotopic patterns, and more. Peptacular uses type annotations extensively, so it is type safe.
☆15Mar 31, 2026Updated last week
Alternatives and similar repositories for peptacular
Users that are interested in peptacular are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Processing and analysis of proteomics data☆17Mar 27, 2026Updated last week
- HUPO-PSI Standardized peptidoform notation☆24Apr 2, 2026Updated last week
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆15Mar 16, 2026Updated 3 weeks ago
- ET-Tox☆12Oct 4, 2024Updated last year
- Code for peptide ligand design with machine learning models.☆32Dec 8, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆21Jan 13, 2025Updated last year
- ☆37Aug 28, 2023Updated 2 years ago
- This work was published on Analytical Chemistry: Full-Spectrum Prediction of Peptides Tandem Mass Spectra using Deep Neural Network☆34Aug 4, 2023Updated 2 years ago
- antimicrobial peptide prediction in R☆33Dec 17, 2024Updated last year
- faster docking☆21Apr 7, 2021Updated 5 years ago
- ☆15Jun 3, 2021Updated 4 years ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Nov 10, 2025Updated 4 months ago
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆17Jul 9, 2024Updated last year
- ☆20Apr 15, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- De Novo Mass Spectrometry Peptide Sequencing with a Transformer Model☆184Updated this week
- pyPept: a python library to generate atomistic 2D and 3D representations of peptides☆91Nov 5, 2025Updated 5 months ago
- Multi-Omics Peptide Generator☆30Nov 6, 2025Updated 5 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆30Feb 12, 2026Updated last month
- Pytorch implementation of DeepNovoV2, a state-of-the-art de novo peptide sequencing model.☆27May 21, 2019Updated 6 years ago
- A diaPASEF spectrum-centric analysis tool☆13Mar 23, 2026Updated 2 weeks ago
- Peptide library design☆23Sep 8, 2020Updated 5 years ago
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 2 weeks ago
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Shiny app for proteomics data analysis☆14Jul 6, 2021Updated 4 years ago
- ☆11Aug 27, 2025Updated 7 months ago
- ☆11Nov 11, 2023Updated 2 years ago
- Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.☆15Sep 19, 2025Updated 6 months ago
- ☆39Feb 5, 2024Updated 2 years ago
- ☆30Mar 23, 2026Updated 2 weeks ago
- Data files for the molecular modelling course☆13Jan 26, 2024Updated 2 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- A simple workflow for minimum energy conformer search based on force field optimization methods (UFF and MMFF94) available from RDKit.☆13May 29, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Oct 4, 2022Updated 3 years ago
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆32Jul 4, 2024Updated last year
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆31Jan 5, 2025Updated last year
- ☆12Jan 14, 2023Updated 3 years ago
- piano - An R/Bioconductor package for gene set analysis☆15Sep 13, 2022Updated 3 years ago
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆33Feb 12, 2026Updated last month
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Jan 16, 2026Updated 2 months ago