CyrilLagger / scDiffComLinks
Difference in Intercellular Communication from scRNA-seq data
☆22Updated last month
Alternatives and similar repositories for scDiffCom
Users that are interested in scDiffCom are comparing it to the libraries listed below
Sorting:
- ☆20Updated last month
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆44Updated 2 months ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆30Updated 8 months ago
- Gene Expression Decomposition and Integration☆19Updated 8 months ago
- Example of run CytoSig and reproduce prediction results on bulk and single-cell cohorts☆14Updated 2 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆28Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- A record of the analysis pipelines used to create the HTAPP data☆33Updated 7 months ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- ☆20Updated 2 years ago
- Single-cell Case Control Analysis☆52Updated 2 weeks ago
- Computational pipeline to process EasySci-RNA data.☆21Updated last year
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated last month
- Trends in single cell papers☆16Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆38Updated 2 years ago
- R package for generalized binary covariance decomposition.☆11Updated 4 months ago
- ☆20Updated 4 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated last week
- Querying cellular states and programs by learning representations of gene sets☆14Updated last week
- Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalsc…☆24Updated last month
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- ☆17Updated last year
- Functional Annotation for Single-Cell Transcriptomics☆11Updated last year
- Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-diseaseMolecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆13Updated last year
- R package IReNA☆28Updated last year
- ☆48Updated last year
- ☆32Updated 9 months ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago