CompOmics / ms2pipLinks
MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
☆47Updated 8 months ago
Alternatives and similar repositories for ms2pip
Users that are interested in ms2pip are comparing it to the libraries listed below
Sorting:
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆72Updated 2 months ago
- Python package for investigating the structural context of PTMs☆28Updated 10 months ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆61Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆52Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Updated last month
- MS/MS prediction for peptides☆24Updated 4 years ago
- ☆13Updated last year
- ☆20Updated 9 months ago
- A python package for fast post translational modification localization, powered by Cython.☆20Updated last year
- Democratizing ML in proteomics☆50Updated 3 weeks ago
- Python framework for Deep Learning in Proteomics☆33Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated this week
- Instrument Application Programming Interface☆51Updated 2 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last month
- A Python interface to proteomics data repositories☆36Updated 5 months ago
- ☆12Updated last month
- ☆22Updated 4 years ago
- An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.☆89Updated 3 weeks ago
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆91Updated 2 years ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last month
- Deep learning framework for proteomics☆137Updated 3 weeks ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- ☆14Updated 3 years ago
- An open-source Python package to unify raw MS data accession and storage.☆28Updated 3 weeks ago
- The Git Account of LCMSMethods.org☆11Updated 6 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆66Updated 2 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 4 months ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago