A GenePattern module for running the ssGSEA method
☆14Mar 3, 2025Updated last year
Alternatives and similar repositories for ssGSEA-gpmodule
Users that are interested in ssGSEA-gpmodule are comparing it to the libraries listed below
Sorting:
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- Code and analyses from "FDR: A New Deal" paper☆15Apr 18, 2017Updated 8 years ago
- A "CRAN extras" repository of some binary R packages for the Homebrew (cask) version of base R on macOS☆23Oct 6, 2022Updated 3 years ago
- Analysis code and results for dreamlet☆11Jul 18, 2025Updated 7 months ago
- ☆10Jan 20, 2023Updated 3 years ago
- Integrating zingeR with ZINB-WaVE weights☆26Feb 15, 2018Updated 8 years ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- ☆11Sep 5, 2018Updated 7 years ago
- ☆14Nov 29, 2025Updated 3 months ago
- home of the bear's lair☆10May 19, 2017Updated 8 years ago
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- Pipeline for RNA and DNA integrated analysis for somatic mutation detection☆14Feb 17, 2026Updated 2 weeks ago
- Faster manipulation of dendrogram objects in R.☆15May 22, 2015Updated 10 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Jan 6, 2021Updated 5 years ago
- My Library of R Helpers☆13Aug 3, 2020Updated 5 years ago
- A Highlighting Library For R☆11Nov 16, 2016Updated 9 years ago
- Provides classes for working with sets☆11Dec 19, 2025Updated 2 months ago
- Reproducible GSEA Benchmarking☆14Oct 30, 2025Updated 4 months ago
- Manage Files Across Sessions☆13Oct 30, 2025Updated 4 months ago
- Creating Debian Packages from CRAN Sources☆12Jul 1, 2020Updated 5 years ago
- ☆13Dec 14, 2023Updated 2 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆12Nov 14, 2020Updated 5 years ago
- Issues and pull requests for BiocStyle should go here.☆14Oct 30, 2025Updated 4 months ago
- Mini installer that contains everything that's necessary to run rhumba☆14May 18, 2021Updated 4 years ago
- Extension of SpatialExperiment with sf☆57Feb 19, 2026Updated 2 weeks ago
- Helper script for bioconductor/bioconductor_docker☆13Feb 26, 2026Updated last week
- GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge☆14Sep 13, 2017Updated 8 years ago
- Modular & interactive analysis components for bioinformatics☆18Dec 9, 2025Updated 3 months ago
- This is the ensembldb development repository.☆36Aug 18, 2025Updated 6 months ago
- Scripts for building R for Windows using rtools40☆32Jun 23, 2022Updated 3 years ago
- R bindings to html-tidy C interface☆14Aug 15, 2022Updated 3 years ago
- Deposit data (or any research object) into Zenodo☆18May 21, 2015Updated 10 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆48Sep 18, 2025Updated 5 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆21Oct 30, 2025Updated 4 months ago
- ☆18Aug 22, 2021Updated 4 years ago
- Multi-Omics Peptide Generator☆30Nov 6, 2025Updated 4 months ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 4 years ago
- Microsatellite Instability Classification using Multiple Instance Learning☆28Mar 3, 2025Updated last year
- download files in R using wget -c☆16Aug 20, 2025Updated 6 months ago