Villen-Lab / pyAscoreLinks
A python package for fast post translational modification localization, powered by Cython.
☆19Updated last year
Alternatives and similar repositories for pyAscore
Users that are interested in pyAscore are comparing it to the libraries listed below
Sorting:
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last month
- Python package for investigating the structural context of PTMs☆28Updated 4 months ago
- ☆20Updated 3 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆43Updated 2 months ago
- A Python interface to proteomics data repositories☆34Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- ☆37Updated 2 months ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated last week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆24Updated last month
- MS/MS prediction for peptides☆22Updated 4 years ago
- ☆14Updated 3 years ago
- ☆26Updated 2 weeks ago
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated last week
- Instrument Application Programming Interface☆47Updated 3 months ago
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆64Updated last month
- The Git Account of LCMSMethods.org☆11Updated 6 years ago
- ☆13Updated last year
- Democratizing ML in proteomics☆37Updated 2 weeks ago
- The Multiplierz Proteomics Library☆24Updated last year
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Updated 6 months ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 3 months ago
- ☆20Updated 3 years ago
- modular & open DIA search☆71Updated this week
- ☆10Updated last month
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆26Updated last week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆49Updated this week