A python package for fast post translational modification localization, powered by Cython.
☆20Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for pyAscore
Users that are interested in pyAscore are comparing it to the libraries listed below
Sorting:
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Oct 2, 2025Updated 4 months ago
- ☆15Apr 27, 2022Updated 3 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Feb 27, 2025Updated last year
- MS/MS prediction for peptides☆24Dec 18, 2020Updated 5 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆23Jul 25, 2025Updated 7 months ago
- A Python interface to proteomics data repositories☆36Jun 19, 2025Updated 8 months ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Feb 17, 2026Updated last week
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆19Updated this week
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆19Feb 19, 2026Updated last week
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Jan 20, 2026Updated last month
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Dec 17, 2025Updated 2 months ago
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆31Oct 5, 2022Updated 3 years ago
- Python client for PRIDE Archive Rest API.☆36Feb 6, 2026Updated 3 weeks ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Nov 24, 2024Updated last year
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆34Feb 20, 2026Updated last week
- Proteomics search & quantification so fast that it feels like magic☆273Jan 6, 2026Updated last month
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Feb 10, 2026Updated 2 weeks ago
- Instrument Application Programming Interface☆51Sep 29, 2025Updated 5 months ago
- The Interactive Peptide Spectral Annotator☆21Jun 9, 2020Updated 5 years ago
- A deep learning toolkit for mass spectrometry☆87Jan 7, 2026Updated last month
- HUPO-PSI mass spectrometry CV☆40Feb 20, 2026Updated last week
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆13Feb 18, 2026Updated last week
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆44Jan 14, 2026Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆30Oct 31, 2025Updated 4 months ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated last year
- Using deep learning to generate in silico spectral libraries for data-independent acquisition analysis.☆43Oct 23, 2022Updated 3 years ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated this week
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆16Feb 22, 2026Updated last week
- Shiny app for proteomics data analysis☆14Jul 6, 2021Updated 4 years ago
- The Git Account of LCMSMethods.org☆11Jun 1, 2019Updated 6 years ago
- Data Processing Kitchen Sink for proteomics data☆13Jan 13, 2026Updated last month
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 3 years ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆16Nov 6, 2025Updated 3 months ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆30Feb 12, 2026Updated 2 weeks ago
- Library for mass spectrometry projects☆27Updated this week
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆46Jun 27, 2022Updated 3 years ago