A python package for fast post translational modification localization, powered by Cython.
☆20Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for pyAscore
Users that are interested in pyAscore are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Jun 5, 2026Updated last month
- ☆17Apr 27, 2022Updated 4 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Jul 10, 2026Updated last week
- A Python interface to proteomics data repositories☆38Jun 19, 2025Updated last year
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Nov 22, 2024Updated last year
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆41Jun 2, 2026Updated last month
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆22Updated this week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆25Apr 8, 2026Updated 3 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆34Mar 21, 2026Updated 4 months ago
- Scalable, accurate and sensitive protein group FDRs for large-scale mass spectrometry experiments☆13Jul 2, 2026Updated 2 weeks ago
- Proteomics search & quantification so fast that it feels like magic☆301Jun 5, 2026Updated last month
- A label free quantification tool.☆20Jan 13, 2026Updated 6 months ago
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆34Jul 3, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- The Interactive Peptide Spectral Annotator☆23Jun 9, 2020Updated 6 years ago
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆32Oct 5, 2022Updated 3 years ago
- Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure☆13Jul 1, 2026Updated 2 weeks ago
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆32Mar 27, 2026Updated 3 months ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆17Jul 5, 2026Updated 2 weeks ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆49Jul 13, 2026Updated last week
- HUPO-PSI mass spectrometry CV☆42Jul 13, 2026Updated last week
- A deep learning toolkit for mass spectrometry☆95May 31, 2026Updated last month
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆15Apr 29, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Library for mass spectrometry projects☆28Updated this week
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆50Updated this week
- EasyPQP: Simple library generation for OpenSWATH☆11Apr 21, 2026Updated 2 months ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- A python package for protein inference in Mass Spectrometric data analysis.☆10Jun 6, 2022Updated 4 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Updated this week
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆45Updated this week
- A Framework for IMS-MS Raw Data Processing written in Rust and Python.☆23Updated this week
- Reporting and exchange format for mass spectrometry quality control data☆33Jul 7, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- Navigation links (and brief descriptions) to my repositories.☆13Nov 25, 2025Updated 7 months ago
- A list of tools on proteomics using deep learning☆109May 14, 2026Updated 2 months ago
- ☆16Jul 2, 2026Updated 2 weeks ago
- Instrument Application Programming Interface☆57May 11, 2026Updated 2 months ago