Villen-Lab / pyAscoreLinks
A python package for fast post translational modification localization, powered by Cython.
☆19Updated last year
Alternatives and similar repositories for pyAscore
Users that are interested in pyAscore are comparing it to the libraries listed below
Sorting:
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated 2 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- MS/MS prediction for peptides☆22Updated 4 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- A Python interface to proteomics data repositories☆34Updated last week
- ☆14Updated 3 years ago
- ☆20Updated 4 months ago
- ☆37Updated 3 months ago
- ☆10Updated last week
- Python package for investigating the structural context of PTMs☆28Updated 5 months ago
- ☆13Updated last year
- An open-source Python package to unify raw MS data accession and storage.☆25Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- EasyPQP: Simple library generation for OpenSWATH☆11Updated 2 months ago
- The Multiplierz Proteomics Library☆24Updated last year
- ☆26Updated last month
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆65Updated 2 weeks ago
- Rescoring and spectral library generation pipeline for proteomics.☆43Updated this week
- ☆20Updated 3 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆44Updated 3 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- Instrument Application Programming Interface☆47Updated 4 months ago
- The Git Account of LCMSMethods.org☆11Updated 6 years ago
- Democratizing ML in proteomics☆37Updated this week
- Data Processing Kitchen Sink for proteomics data☆11Updated last month
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated 3 weeks ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆21Updated 2 months ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Updated 7 months ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 3 months ago
- Python framework for Deep Learning in Proteomics☆27Updated last week