rusteomics / mzcoreLinks
A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly
☆35Updated last week
Alternatives and similar repositories for mzcore
Users that are interested in mzcore are comparing it to the libraries listed below
Sorting:
- ☆28Updated 5 months ago
- A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.☆32Updated this week
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆48Updated last week
- HUPO-PSI Standardized peptidoform notation☆21Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 8 months ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆14Updated 4 months ago
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Updated 3 weeks ago
- ☆30Updated last week
- Democratizing ML in proteomics☆44Updated 2 months ago
- Spectral library searching using approximate nearest neighbor techniques.☆45Updated 6 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆49Updated last week
- ☆20Updated 8 months ago
- Python package for investigating the structural context of PTMs☆28Updated 9 months ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated last month
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆11Updated 11 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 7 months ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 8 months ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- A Python interface to proteomics data repositories☆35Updated 4 months ago
- ☆42Updated 7 months ago
- High quality in silico spectral library generation for data-independent acquisition proteomics☆16Updated 2 weeks ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- Matthew The's implementation of MaRaCluster☆11Updated 4 months ago
- Instrument Application Programming Interface☆51Updated last month
- Open-source C++ and Python module for opening binary timsTOF data files.☆49Updated 4 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆90Updated 2 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated 2 months ago
- CLI toolkit for fast analysis of DIA proteomics experiments and in silico library prediction☆19Updated last week
- DeepLC: Retention time prediction for (modified) peptides using Deep Learning.☆70Updated last month