A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.
☆26Aug 5, 2026Updated this week
Alternatives and similar repositories for scSemiProfiler
Users that are interested in scSemiProfiler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆39May 31, 2026Updated 2 months ago
- ☆58Mar 23, 2025Updated last year
- ☆28May 22, 2025Updated last year
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆60Jul 22, 2026Updated 2 weeks ago
- ☆100Aug 3, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Sep 30, 2024Updated last year
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆18Aug 9, 2025Updated last year
- Single-Cell Inference of Class Switch Recombination☆24Jun 19, 2026Updated last month
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆258Mar 14, 2026Updated 4 months ago
- Code used to process the data of the HBCA project☆33Feb 9, 2024Updated 2 years ago
- Pipeline framework for iteratively and reproducibly building and evaluating single cell atlases☆69Jul 29, 2026Updated last week
- Feature selection for preserving biological trajectories in single-cell data☆22Jun 24, 2026Updated last month
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Dec 11, 2025Updated 8 months ago
- mosaicMPI: mosaic multi-resolution program integration☆12Jul 9, 2026Updated last month
- ☆19Apr 16, 2026Updated 3 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆54Feb 16, 2026Updated 5 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆13Jun 16, 2025Updated last year
- Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding☆16Sep 11, 2025Updated 11 months ago
- ☆62Feb 13, 2026Updated 5 months ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Robust and scalable single-cell signature scoring☆28Jul 28, 2026Updated 2 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Annotatability, a method to identify meaningful patterns in single-cell genomics data through annotation-trainability analysis, which est…☆19Jun 23, 2025Updated last year
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆23May 13, 2026Updated 2 months ago
- CHOIR : Clustering Hierarchy Optimization by Iterative Random forests (www.CHOIRclustering.com)☆93Apr 15, 2026Updated 3 months ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated 2 years ago
- ☆30Jan 30, 2026Updated 6 months ago
- ☆18Jan 23, 2026Updated 6 months ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆34Oct 11, 2024Updated last year
- A tool for semi-automatic cell type harmonization and integration☆121Mar 9, 2026Updated 5 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- DEGAS is an R package that can be used to prioritize cells in relation to disease.☆14Nov 6, 2024Updated last year
- Personalized prioritization of driver genes in cancer☆10Mar 14, 2022Updated 4 years ago
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated 2 years ago
- ☆12Jan 8, 2026Updated 7 months ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆35Sep 14, 2024Updated last year
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆23Jul 30, 2026Updated last week
- A Python package for unsupervised analysis of spatial (prote)omics data.☆19Jul 23, 2026Updated 2 weeks ago