A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.
☆26Jun 7, 2025Updated 10 months ago
Alternatives and similar repositories for scSemiProfiler
Users that are interested in scSemiProfiler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data☆37Nov 28, 2025Updated 4 months ago
- UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.☆54Feb 18, 2026Updated last month
- ☆92Mar 30, 2026Updated last week
- ☆55Mar 23, 2025Updated last year
- ☆27May 22, 2025Updated 10 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆13Sep 30, 2024Updated last year
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆17Mar 27, 2026Updated 2 weeks ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆16Aug 9, 2025Updated 8 months ago
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆244Mar 14, 2026Updated 3 weeks ago
- Single-Cell Inference of Class Switch Recombination☆21Feb 11, 2026Updated 2 months ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- Code used to process the data of the HBCA project☆33Feb 9, 2024Updated 2 years ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆10Sep 20, 2022Updated 3 years ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆30Oct 11, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Feature selection for preserving biological trajectories in single-cell data☆22May 29, 2025Updated 10 months ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆32Dec 11, 2025Updated 4 months ago
- Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding☆16Sep 11, 2025Updated 7 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆12Jun 16, 2025Updated 9 months ago
- Data files and code for analysis of single-cell ccRCC data for the manuscript "Tumor-Specific Cell Populations in Clear Cell Renal Carcin…☆53Feb 16, 2026Updated last month
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Annotatability, a method to identify meaningful patterns in single-cell genomics data through annotation-trainability analysis, which est…☆19Jun 23, 2025Updated 9 months ago
- ☆33Jan 9, 2024Updated 2 years ago
- mosaicMPI: mosaic multi-resolution program integration☆12Mar 30, 2026Updated last week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Single-cell dubious embedding detector (scDED): a statistical method for detecting dubious non-linear embeddings☆48May 14, 2025Updated 10 months ago
- Functional Annotation for Single-Cell Transcriptomics☆11Jun 29, 2024Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- Predictive Biomarker Modeling Framework (PBMF)☆24Apr 21, 2025Updated 11 months ago
- ☆19Jan 10, 2025Updated last year
- A tool for semi-automatic cell type harmonization and integration☆120Mar 9, 2026Updated last month
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆34Sep 14, 2024Updated last year
- ☆12Jan 8, 2026Updated 3 months ago
- ☆19May 8, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Perturbation-response Score (PS) analysis is a method to quantify diverse perturbation responses and discover novel biological insights i…☆17Apr 20, 2024Updated last year
- ☆15Feb 28, 2025Updated last year
- ☆46May 4, 2024Updated last year
- MeRIP-seq analysis pipeline arranged multiple alignment tools, peakCalling tools, Merge Peaks' methods and methylation analysis methods.☆22Jun 18, 2021Updated 4 years ago
- stPlus: reference-based enhancement of spatial transcriptomics☆20Jan 6, 2024Updated 2 years ago
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆24Mar 20, 2024Updated 2 years ago
- These are scripts for pan-cacner B cells analyses.☆57Jul 22, 2024Updated last year