luciorq / isoformicLinks
Isoform-level functional RNA-Seq analysis π§¬
β33Updated last week
Alternatives and similar repositories for isoformic
Users that are interested in isoformic are comparing it to the libraries listed below
Sorting:
- Differential expression and allelic analysis, nonparametric statisticsβ29Updated 9 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.β34Updated 3 years ago
- interactive plots for differential expression analysisβ34Updated 4 months ago
- Interactive R package to quantify, analyse and visualise alternative splicingβ37Updated this week
- β33Updated 10 months ago
- Flexible and efficient parsing, interpreting and editing of sequencing readsβ44Updated last week
- Sashimi plots for RNA-seq data using detected transcriptsβ29Updated 7 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signalsβ34Updated 4 years ago
- ireadβ25Updated 4 years ago
- Merge fastq files split over lanesβ20Updated 7 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq dataβ42Updated 3 years ago
- An R interface to the MEME Suiteβ52Updated 4 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.β19Updated 3 years ago
- Calculate and plot distributions of genomic rangesβ26Updated 6 months ago
- DRAGEN Tumor/Normal workflow post-processingβ23Updated 2 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.β36Updated last year
- Snakemake pipeline for running MAJIQβ23Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataβ26Updated 2 weeks ago
- A small R package to make sequencing read coverage plots in R.β39Updated 2 weeks ago
- Flexible Bayesian inference of mutational signaturesβ36Updated 2 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditionsβ39Updated 3 years ago
- β23Updated 4 years ago
- β27Updated 2 years ago
- Transcript quantification import with automatic metadata detectionβ67Updated 2 weeks ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneitβ¦β38Updated last year
- π An R package of RNA-seq workflowβ15Updated 3 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutationβ22Updated 3 weeks ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomicsβ50Updated last week
- β29Updated last year
- ORF Quantification pipeline for Alternative Splicingβ16Updated 4 years ago