snijderlab / annotatorLinks
A simple tool to help you manually discover the depths of your (complex) spectra, one spectrum at a time.
☆28Updated this week
Alternatives and similar repositories for annotator
Users that are interested in annotator are comparing it to the libraries listed below
Sorting:
- A Rust library for peptide centric mass spec calculations centered around ProForma and complex theoretical fragmentation☆34Updated last week
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 6 months ago
- ☆28Updated 3 months ago
- ☆20Updated 7 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆48Updated 2 weeks ago
- Repository for Deep Learning Models for Mass Spectrometry written in Rust☆14Updated 3 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆45Updated 6 months ago
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated last week
- A Python interface to proteomics data repositories☆35Updated 3 months ago
- Democratizing ML in proteomics☆43Updated 3 weeks ago
- Deep learning framework for proteomics☆131Updated 2 weeks ago
- Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling☆25Updated 11 months ago
- Rescoring and spectral library generation pipeline for proteomics.☆48Updated 2 weeks ago
- A CLI for pairwise alignment of sequences, using both normal and mass based alignment.☆13Updated 2 weeks ago
- GlyCombo, a combinatorial glycan composition assignment tool☆12Updated 7 months ago
- Instrument Application Programming Interface☆51Updated this week
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- Python package for investigating the structural context of PTMs☆28Updated 8 months ago
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆39Updated 2 months ago
- Spectral library searching using approximate nearest neighbor techniques.☆44Updated 4 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 weeks ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated 2 weeks ago
- Python framework for Deep Learning in Proteomics☆30Updated last month
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆121Updated 2 months ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 months ago
- ☆39Updated 6 months ago
- ☆13Updated last year
- ☆14Updated 3 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆29Updated last month