Alternatives and similar repositories for ELATUS:

Users that are interested in ELATUS are comparing it to the libraries listed below

• UPSUTER / GEMLI
  ☆30Updated 2 months ago
• Teddy-XiongGZ / DeepGSEA
  ☆16Updated 8 months ago
• PoolLab / ReferenceEnhancer
  ☆20Updated last year
• gambalab / gficf
  An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
  ☆18Updated last year
• gxiaolab / scAllele
  ☆33Updated 11 months ago
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆21Updated last year
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆17Updated last month
• wenweixiong / MARVEL
  ☆46Updated 8 months ago
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆18Updated last year
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 5 months ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 3 weeks ago
• netbiolab / scHumanNet
  Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3
  ☆40Updated last year
• juliaolivieri / SpliZ_pipeline
  Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis
  ☆32Updated 3 years ago
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆25Updated 5 months ago
• kris-nader / scTherapy
  Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…
  ☆8Updated last month
• xyang2uchicago / BioTIP
  BioTIP: Biological Tipping-Point Identification and Characterization
  ☆18Updated 3 months ago
• madilabcode / scNET
  ☆20Updated this week
• dbrg77 / ISSAAC-seq
  ☆16Updated 2 years ago
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆19Updated last year
• bcgsc / RNA-Scoop
  interactive visualization of single-cell transcriptomes
  ☆11Updated last year
• loosolab / scanpro
  A modular tool for proportion analysis in single-cell sequencing data
  ☆18Updated last month
• AdelmanLab / NIH_scripts
  A collection of perl scripts for NGS analysis
  ☆15Updated 6 months ago
• woojunshim / TRIAGE
  Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)
  ☆9Updated last year
• tanaylab / embflow
  ☆12Updated 2 years ago
• guokai8 / rcellmarker
  Identify cell type based on cell markers for single cell squencing
  ☆10Updated 8 months ago
• mqzhanglab / BSDE
  A single-cell RNAseq differential expression analysis approach in case-control study
  ☆9Updated 3 years ago
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆29Updated 2 weeks ago
• JunyueCaoLab / EasySci
  Computational pipeline to process EasySci-RNA data.
  ☆18Updated last year
• Jiaxin-Fan / MuSiC2
  cell type deconvolution for multi-condition bulk RNA-seq data
  ☆24Updated 3 years ago
• mingjingsi / FIRM
  Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
  ☆12Updated 2 years ago