Alternatives and similar repositories for ELATUS

Users that are interested in ELATUS are comparing it to the libraries listed below

• stephenslab / gbcd
  R package for generalized binary covariance decomposition.
  ☆10Updated this week
• FertigLab / pycogaps
  python API to the CoGAPS NMF package
  ☆19Updated last month
• pachterlab / CGCCP_2023
  scVI extension for unspliced RNA
  ☆16Updated last month
• csglab / GEDI
  Gene Expression Decomposition and Integration
  ☆18Updated 4 months ago
• woojunshim / TRIAGE
  Transcriptional Regulatory Inference Analysis from Gene Expression (TRIAGE)
  ☆9Updated last year
• xyang2uchicago / BioTIP
  BioTIP: Biological Tipping-Point Identification and Characterization
  ☆20Updated 3 weeks ago
• mingjingsi / FIRM
  Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets
  ☆12Updated 2 years ago
• hsmaan / Iniquitate
  Analysis of imbalanced data and its impacts in a scRNA-seq integration setting
  ☆30Updated 4 months ago
• Vivianstats / scINSIGHT
  Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data
  ☆21Updated last year
• gambalab / gficf
  An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization
  ☆18Updated last year
• Zafar-Lab / Margaret
  Metric learning-based graph-partitioned trajectory inference from single-cell data
  ☆11Updated 2 years ago
• BradBalderson / Cytocipher
  Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…
  ☆38Updated last year
• caleblareau / maegatk
  Mitochondrial Alteration Enrichment and Genome Analysis Toolkit
  ☆19Updated last year
• soumelis-lab / ICELLNET
  ☆20Updated last week
• ChenWeiyan / LandSCENT
  Landscape Single Cell Entropy
  ☆20Updated 4 years ago
• CyrilLagger / scDiffCom
  Difference in Intercellular Communication from scRNA-seq data
  ☆21Updated last year
• mqzhanglab / BSDE
  A single-cell RNAseq differential expression analysis approach in case-control study
  ☆9Updated 3 years ago
• gxiaolab / scAllele
  ☆35Updated last year
• MarioniLab / StabMap
  Mosaic single cell data integration using non-overlapping features
  ☆37Updated 2 years ago
• lhqing / wmb2023
  Code and data sharing of Liu et al. 2023 manuscript
  ☆15Updated 2 years ago
• dbrg77 / ISSAAC-seq
  ☆17Updated 2 years ago
• alexQiSong / scSTEM
  Single cell STEM (scSTEM) is a shiny app based R package for visualizing and clustering genes in pseudotime ordered single cell RNA-seq d…
  ☆18Updated 3 years ago
• UPSUTER / GEMLI
  ☆32Updated 5 months ago
• veltenlab / mitoClone
  ☆12Updated 4 years ago
• jiang-junyao / IReNA
  R package IReNA
  ☆28Updated 8 months ago
• lueckenlab / single-cell-papers-trends
  Trends in single cell papers
  ☆15Updated 9 months ago
• Teddy-XiongGZ / DeepGSEA
  ☆17Updated last year
• mardzix / bcd_nano_CUTnTag
  ☆12Updated last year
• JinmiaoChenLab / FastIntegration
  FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis
  ☆23Updated 8 months ago
• jiang-junyao / CACIMAR
  cross-species analysis of cell identities, markers and regulations
  ☆12Updated this week