A canonical correlation analysis based method for discovering (quantitative) trait-specific heterogeneous regulatory networks.
☆32May 8, 2026Updated 5 months ago
Alternatives and similar repositories for SmCCNet
Users that are interested in SmCCNet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Regulatory networks with Direct Information☆19Oct 14, 2019Updated 7 years ago
- Tool comparison for detecting differentially expressed individual transposable elements☆12Jan 7, 2022Updated 4 years ago
- Source Code for the scIBD manuscript☆10May 4, 2023Updated 3 years ago
- ☆17Jul 8, 2024Updated 2 years ago
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆12Aug 1, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Tools for building and manipulating graphs in Python☆46Dec 18, 2025Updated 10 months ago
- Bayesian-based fetal genotyping using maternal cell-free DNA and parental sequencing data.☆14Jun 5, 2019Updated 7 years ago
- ☆38Dec 3, 2017Updated 8 years ago
- VirusScan Pipeline☆12Feb 7, 2026Updated 9 months ago
- ☆16Mar 15, 2026Updated 7 months ago
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆20Updated this week
- RNA-seq workflow for Snakemake based on STAR and featureCounts.☆24May 25, 2019Updated 7 years ago
- This repository contains code and data for reproducing the data-adaptive filtering method described in "Filtering procedures for untarget…☆11Apr 6, 2019Updated 7 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Jan 20, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- [ARCHIVE - very out of date] Intro textbook for web development with Sinatra and ActiveRecord☆13Dec 31, 2015Updated 10 years ago
- ☆23Apr 3, 2023Updated 3 years ago
- VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF f…☆19Oct 27, 2021Updated 5 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- Transcript specific RNA splicing events lookup☆10Jun 22, 2026Updated 4 months ago
- Kraken extension to identify viral contigs☆10Dec 4, 2020Updated 5 years ago
- ☆30Apr 11, 2023Updated 3 years ago
- Estimating maximum growth rates of bacteria from genomic data with Phydon.☆10Sep 18, 2025Updated last year
- Bayesian network toolkit, with applications for phylogenetic analysis☆12Oct 28, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A curated list of healthcare MCP servers for FHIR, clinical decision support, revenue cycle, and HIPAA-compliant AI workflows☆18Jul 15, 2026Updated 3 months ago
- All managed C# parser for SQLite3 databases. Provides read-only access☆12Oct 25, 2026Updated last week
- Code for the paper "MetaQ: fast, scalable and accurate metacell inference via deep single-cell quantization"☆29Jul 27, 2026Updated 3 months ago
- cyREST examples for Python users.☆11Feb 20, 2018Updated 8 years ago
- The seqtime R package provides functions to analyse sequencing data time series and to simulate community dynamics☆20Dec 9, 2022Updated 3 years ago
- ☆23Sep 19, 2025Updated last year
- manual describing dynamic causal modeling with tutorial scripts and data☆10Jan 28, 2015Updated 11 years ago
- hiHMM: Bayesian non-parametric joint inference of chromatin state maps☆10Jan 28, 2015Updated 11 years ago
- Convert arbitrary EHR extracts to FHIR.☆13Apr 27, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Spending less time on SDRF creates more time for amazing research☆10Oct 15, 2025Updated last year
- Profile RNA-seq data using published TB gene signatures☆13Dec 15, 2025Updated 10 months ago
- a series of R programs to accompany the book Cause and correlation in biology☆19Dec 1, 2023Updated 2 years ago
- Python toolbox for multi-omics data mapping and analysis☆29Apr 13, 2023Updated 3 years ago
- This is a read-only mirror of the CRAN R package repository. tuneR — Analysis of Music and Speech☆11Apr 17, 2024Updated 2 years ago
- ☆10Aug 7, 2023Updated 3 years ago
- my CV using pagedown☆11Mar 17, 2021Updated 5 years ago