Xinglab / IRISLinks
IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
β25Updated last year
Alternatives and similar repositories for IRIS
Users that are interested in IRIS are comparing it to the libraries listed below
Sorting:
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.β28Updated 4 years ago
- πΊ Exploring novel tumor epitope identificationβ34Updated 4 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.β19Updated 3 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity predictionβ21Updated 2 years ago
- Comparison of Adaptive Immune Receptor Repertoiresβ27Updated 7 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditionsβ39Updated 3 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embeddedβ24Updated 3 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profilesβ29Updated 5 years ago
- R package for nucleotide conversion sequencing data analysisβ15Updated 6 months ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq dataβ30Updated 3 years ago
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.β26Updated 3 years ago
- β19Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer driversβ15Updated 6 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigensβ29Updated 4 years ago
- Explore the cancer relevance of your gene listβ51Updated 6 months ago
- A collection of perl scripts for NGS analysisβ16Updated 10 months ago
- A single-cell and spatial RNA-seq database for Alzheimerβs Diseaseβ24Updated last year
- β18Updated 3 years ago
- β23Updated 3 years ago
- Versatile FASTA/FASTQ demultiplexer.β33Updated last year
- model-based understanding of single-cell CRISPR screeningβ24Updated 8 months ago
- Computational identification of targets for CAR-T cell therapy in AMLβ18Updated 2 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022β23Updated 3 years ago
- TRUST4 manuscript evaluationβ15Updated 3 years ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysisβ34Updated 3 years ago
- Tutorials for the crisprVerseβ14Updated 6 months ago
- BPNet manuscript code.β12Updated 4 years ago
- Code to run OncoSig Analysesβ18Updated 4 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, β¦β31Updated 3 weeks ago
- epigenome analysis to rank transcription factorsβ13Updated 5 years ago