nwamsley1 / Pioneer.jl

Related projects ⓘ

Alternatives and complementary repositories for Pioneer.jl

• MannLabs / timsrust
  ☆24Updated 2 weeks ago
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated last month
• snijderlab / rustyms
  A rust library for parsing Pro Forma peptides and matching them against MS spectra
  ☆16Updated this week
• theGreatHerrLebert / sagepy
  A python interface to the SAGE search engine for mass spectrometry proteomics
  ☆11Updated this week
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆19Updated 3 weeks ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆36Updated this week
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆43Updated 2 months ago
• Nesvilab / PTM-Shepherd
  A tool for summarizing open search results
  ☆14Updated last month
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆44Updated last month
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆18Updated 11 months ago
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆42Updated last week
• EuBIC / EuBIC2023
  EuBIC 2023 developer's meeting
  ☆13Updated last year
• gtluu / timsconvert
  ☆31Updated last month
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆21Updated 4 months ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆33Updated this week
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated last year
• pFindStudio / pGlyco3
  ☆15Updated 2 months ago
• Nesvilab / diaTracer
  A diaPASEF spectrum-centric analysis tool
  ☆12Updated 4 months ago
• abdrakhimov1 / Biosaur
  ☆14Updated 2 years ago
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆15Updated 9 months ago
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆33Updated 2 months ago
• wilhelm-lab / dlomix
  Python framework for Deep Learning in Proteomics
  ☆23Updated 2 weeks ago
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆45Updated last week
• thermofisherlsms / RawFileReader
  ☆50Updated last month
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆28Updated this week
• mafreitas / tdf2mzml
  ☆25Updated last year
• PRIDE-Archive / pridepy
  Python client for PRIDE Archive Rest API.
  ☆17Updated 3 weeks ago
• mhoopmann / mstoolkit
  Automatically exported from code.google.com/p/mstoolkit
  ☆27Updated last month
• MatteoLacki / timspy
  ☆17Updated 3 years ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 3 years ago