simonorozcoarias / Inpactor2Links
Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
☆26Updated 2 months ago
Alternatives and similar repositories for Inpactor2
Users that are interested in Inpactor2 are comparing it to the libraries listed below
Sorting:
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆39Updated this week
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated last week
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated 8 months ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- Yet another Hi-C scaffolding tool☆21Updated 10 months ago
- Inferring natural selection by comparative population genomic analysis across species☆24Updated last year
- A pipeline for genomic variant detection with genome assemblies at population scale☆25Updated 2 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆27Updated 3 weeks ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Computational Analysis of Gene Expression Evolution☆43Updated last week
- ☆42Updated last year
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- ☆28Updated 3 years ago
- ☆29Updated last year
- Consensus genome annotation using OMA☆26Updated 2 months ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆23Updated 2 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- Snakemake pipeline to analyze transposable element 'omics data.☆27Updated this week
- ☆30Updated 7 months ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated 11 months ago
- ☆27Updated 2 years ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- An R package to infer and analyze synteny networks from protein sequences☆30Updated last month
- ☆23Updated last year
- conserved non-coding sequence☆14Updated 3 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆26Updated 6 months ago
- ☆27Updated this week
- Simple tools for working with Hi-C data☆18Updated 6 years ago