Alternatives and similar repositories for ANGeS

Users that are interested in ANGeS are comparing it to the libraries listed below

• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆22Updated last year
• jkimlab / DESCHRAMBLER
  ☆24Updated last year
• tangerzhang / calc_switchErr
  ☆27Updated 4 months ago
• Longhui-Ren / Ancestral_Genome_Reconstruction
  Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO
  ☆13Updated 6 years ago
• SwallowGenomics / BarnSwallow
  ☆12Updated 2 years ago
• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆29Updated last week
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆17Updated 2 years ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆21Updated last year
• panlab-bioinfo / Gap-Aid
  ☆12Updated last month
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• A-J-F-Mackintosh / syngraph
  Toolkit for evolutionary analyses of linkage groups
  ☆32Updated last year
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆32Updated 7 months ago
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• c-zhou / polyGembler
  ☆16Updated 3 years ago
• rpianezza / GenomeDelta
  Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…
  ☆17Updated 9 months ago
• ChenHuaLab / Beta-PSMC
  ☆12Updated 5 years ago
• LQHHHHH / paml-yn00-run-pipeline
  A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method
  ☆10Updated 6 months ago
• rivasiker / autocoalhmm
  Automated pipeline for running CoalHMM
  ☆13Updated last year
• harris-2374 / THEx
  Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.
  ☆14Updated last year
• simonhmartin / asynt
  Genome alignment and synteny plots
  ☆31Updated 2 years ago
• lardo / khaper
  ☆28Updated 3 years ago
• ShiuLab / PseudogenePipeline
  ☆40Updated 2 years ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆24Updated 5 months ago
• Argonum-Clever2 / mike
  ☆31Updated 5 months ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 6 years ago
• wangzihell / IntroBlocker
  The IntroBlocker ancestry inference algorithm
  ☆15Updated last year
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆24Updated last year
• tbenavi1 / KMC
  Fast and frugal disk based k-mer counter
  ☆14Updated 4 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆35Updated last year
• nbedelman / DiscovarCompGenomics
  ☆12Updated 5 years ago