cchauve / ANGeSLinks
Reconstruction of ancestral genome maps
☆16Updated 7 years ago
Alternatives and similar repositories for ANGeS
Users that are interested in ANGeS are comparing it to the libraries listed below
Sorting:
- ☆27Updated 5 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- Robust identification of orthologous Synteny with the Orthology Index☆29Updated 2 weeks ago
- ☆21Updated last year
- ☆12Updated 2 years ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- ☆24Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 7 months ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- ☆25Updated 3 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- ☆12Updated this week
- ☆31Updated 6 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 9 months ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 6 months ago
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- The IntroBlocker ancestry inference algorithm☆15Updated last year
- Automated pipeline for running CoalHMM☆13Updated last year
- Inferring natural selection by comparative population genomic analysis across species☆25Updated last year
- ☆16Updated 3 years ago
- ☆30Updated 8 months ago
- ☆12Updated 6 years ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated 4 months ago
- Deleterious mutation prediction pipeline☆13Updated 9 months ago
- Domain based annotation of transposable elements☆20Updated 4 months ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Fast and frugal disk based k-mer counter☆14Updated 4 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year