cchauve / ANGeSLinks
Reconstruction of ancestral genome maps
☆16Updated 7 years ago
Alternatives and similar repositories for ANGeS
Users that are interested in ANGeS are comparing it to the libraries listed below
Sorting:
- A genome assembly assessment pipeline.☆37Updated last year
- ☆24Updated last year
- ☆27Updated 6 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- ☆12Updated last week
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 8 months ago
- ☆32Updated 6 months ago
- ☆21Updated last year
- Robust identification of orthologous Synteny with the Orthology Index☆31Updated last month
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Centromics: visualing centromeres with multiple omics data☆24Updated 7 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated 10 months ago
- The IntroBlocker ancestry inference algorithm☆16Updated last year
- ☆13Updated last month
- ☆30Updated 9 months ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated 4 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 7 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago
- Automated pipeline for running CoalHMM☆13Updated last year
- ☆12Updated 6 years ago
- Pooled Sequencing Analysis for Sex Signal☆11Updated 4 years ago
- ☆17Updated 9 months ago
- ☆25Updated 3 years ago
- Domain based annotation of transposable elements☆20Updated this week
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- Genome alignment and synteny plots☆32Updated 2 years ago
- Software package for estimating fine-scale recombination rate.☆16Updated 4 years ago