☆11Aug 19, 2026Updated 2 weeks ago
Alternatives and similar repositories for dante_ltr
Users that are interested in dante_ltr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Domain based annotation of transposable elements☆25Jul 21, 2026Updated last month
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last month
- ☆11Dec 12, 2014Updated 11 years ago
- TEtrimmer: a novel tool to automate manual curation of transposable elements☆118Jul 27, 2026Updated last month
- ☆23Feb 26, 2026Updated 6 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- read and analyse RepeatMasker output☆27May 22, 2023Updated 3 years ago
- MCHelper: An automatic tool to curate transposable element libraries☆50Aug 5, 2026Updated last month
- ☆40Jun 19, 2023Updated 3 years ago
- Inpactor2: LTR retrotransposon detector and classificator using Deep Learning☆30Jun 17, 2025Updated last year
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆21Jun 10, 2025Updated last year
- ANI based satellite annotation☆29Aug 6, 2026Updated last month
- ☆23Jan 13, 2026Updated 7 months ago
- genomic alignment similarity search tool☆20Jun 26, 2026Updated 2 months ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Jan 16, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- High throughput python tool for mining and analysis of gene duplications.☆17Jul 30, 2026Updated last month
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- ☆19Jul 12, 2026Updated last month
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆15Oct 1, 2021Updated 4 years ago
- JTK -- a regional diploid genome assembler☆27Apr 22, 2026Updated 4 months ago
- Improved long-read assembly by preserving contained reads☆29Aug 22, 2024Updated 2 years ago
- An easy-to-use python package can be used for genomic visual analysis☆23Apr 20, 2024Updated 2 years ago
- A more efficient quality control tool for sequencing data☆33May 27, 2025Updated last year
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Robust individual and aggregate checksums for nucleotide sequences☆18Mar 3, 2026Updated 6 months ago
- De-Novo Repeat Discovery Tool☆244Updated this week
- Fast Neighbor-Joining and other distance-based methods for phylogenetics☆16Jun 21, 2024Updated 2 years ago
- LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also…☆220Jun 30, 2026Updated 2 months ago
- SV genotyper for long reads with a variation graph☆16Apr 15, 2026Updated 4 months ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated last year
- Enumerating bubbles in pangenome graphs☆16Aug 26, 2026Updated last week
- Identification of transposable element families from pangenome polymorphisms☆57Aug 11, 2026Updated 3 weeks ago
- Scripts to do haplotype analysis on pan genomes.☆20Sep 24, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- test repository☆29Jul 6, 2023Updated 3 years ago
- Neural network classification of TE☆102Apr 3, 2026Updated 5 months ago
- ☆28May 12, 2026Updated 3 months ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 6 months ago
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆18Aug 5, 2026Updated last month
- A tool for evaluating long-read de novo assembly results☆54Aug 25, 2024Updated 2 years ago
- Annotation of cryptic transposon variants using Hidden Markov Models to detect conserved terminal features.☆10Updated this week