This is a method to find telomeres and centromeres in plants.
☆43Jun 17, 2023Updated 3 years ago
Alternatives and similar repositories for Telomeres_and_Centromeres
Users that are interested in Telomeres_and_Centromeres are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Jul 25, 2021Updated 5 years ago
- Polygenetic Basis of Seedlessness in Grapevine (Vitis vinifera L.)☆10Mar 11, 2025Updated last year
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- Methods for assembling high-quality genomes☆12Jul 7, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Phasing of dikaryotic fungal genome assemblies☆13Mar 1, 2023Updated 3 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆38Jun 6, 2022Updated 4 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆39Mar 5, 2023Updated 3 years ago
- Methods and recipes for Plant Genome Annotation - Transposable Elements☆21Jun 10, 2025Updated last year
- conserved non-coding sequence☆19Feb 21, 2022Updated 4 years ago
- Deep Learning Framework for Transposable Element Discovery and Annotation☆12Aug 18, 2026Updated 2 months ago
- Centromics: visualing centromeres with multiple omics data☆28Mar 4, 2025Updated last year
- Identify and find telomeres, or telomeric repeats in a genome.☆180Updated this week
- A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification☆191Jun 23, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- SRF: Satellite Repeat Finder☆110Jan 8, 2024Updated 2 years ago
- Plant genome assembly and annotation pipeline using snakemake☆55May 14, 2025Updated last year
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- A mass non-curated database of potential telomeric repeat sequences across the eukaryotic tree of life.☆13Oct 10, 2026Updated 2 weeks ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆59Oct 9, 2026Updated 2 weeks ago
- ☆27Jun 27, 2026Updated 4 months ago
- A plant organellar Graphical Fragment Assembly toolkit☆17Oct 15, 2026Updated 2 weeks ago
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27May 24, 2021Updated 5 years ago
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆20Mar 21, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pipleline for deep centromeres analysis with CENdetectHOR☆11Aug 24, 2026Updated 2 months ago
- ☆30Oct 20, 2023Updated 3 years ago
- ☆42May 19, 2025Updated last year
- ☆15Aug 6, 2025Updated last year
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆32Apr 2, 2026Updated 6 months ago
- Scripts and datasets for the analysis on convergent genome evolution of animal terrestrialisation☆16Sep 27, 2025Updated last year
- ☆11Mar 25, 2019Updated 7 years ago
- ☆21Jul 12, 2026Updated 3 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 25, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Resistify is a program which rapidly identifies and classifies plant NLR and PRR genes from protein sequences. It is designed to be light…☆52Jul 22, 2026Updated 3 months ago
- ggideogram is a ggplot2 extension package for drawing chromosome diagrams☆20Nov 29, 2024Updated last year
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2026Updated last month
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆41Oct 17, 2026Updated last week
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 10 months ago
- A organelle de novo genome assembly toolkit☆89Feb 22, 2025Updated last year
- ☆30Mar 4, 2022Updated 4 years ago