Alternatives and similar repositories for ggcoverage

Users that are interested in ggcoverage are comparing it to the libraries listed below

• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆209Updated last month
• TickingClock1992 / RIdeogram
  ☆187Updated 5 years ago
• noriakis / ggkegg
  Analyzing and visualizing KEGG information using the grammar of graphics
  ☆235Updated 2 weeks ago
• dzhang32 / ggtranscript
  Visualizing transcript structure and annotation using ggplot2
  ☆160Updated last year
• ewels / sra-explorer
  Web application to explore the Sequence Read Archive.
  ☆217Updated 3 months ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆345Updated 4 months ago
• YaoLab-Bioinfo / shinyCircos
  an R/shiny application for creation of Circos plot interactively
  ☆157Updated 3 years ago
• PoisonAlien / trackplot
  Generate IGV style locus tracks from bigWig files in R
  ☆172Updated last year
• griffithlab / rnabio.org
  website for the rnaseq course
  ☆110Updated this week
• jiabowang / GAPIT
  Genome Association Predict Integrate Tools
  ☆212Updated this week
• im3sanger / dndscv
  dN/dS methods to quantify selection in cancer and somatic evolution
  ☆226Updated 5 months ago
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated 3 weeks ago
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆239Updated 2 weeks ago
• knausb / vcfR
  Tools to work with variant call format files
  ☆262Updated 8 months ago
• loukesio / ggvolc
  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …
  ☆65Updated last month
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆190Updated last month
• PF2-pasteur-fr / SARTools
  Statistical Analysis of RNA-Seq Tools
  ☆108Updated 3 weeks ago
• rpetit3 / fastq-dl
  Download FASTQ files from SRA or ENA repositories.
  ☆348Updated 4 months ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆225Updated last year
• raynamharris / Shell_Intro_for_Bioinformatics_STG
  Intro to Shell for Bioinformatics - with STG examples
  ☆28Updated 9 years ago
• davetang / learning_vcf_file
  Learning the Variant Call Format
  ☆144Updated 2 months ago
• JoniColeman / gwas_scripts
  Codebook from my GWAS cookbook
  ☆193Updated 3 years ago
• quinlan-lab / sllobs-biostats
  ☆73Updated 3 years ago
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆105Updated 4 years ago
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆143Updated last month
• signalbash / how_are_we_stranded_here
  Check strandedness of RNA-Seq fastq files
  ☆127Updated 3 years ago
• ivanek / Gviz
  This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
  ☆87Updated 9 months ago
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆190Updated 8 months ago
• al2na / methylKit
  R package for DNA methylation analysis
  ☆238Updated last month